ENSDARG00000007630


Danio rerio

Features
Gene ID: ENSDARG00000007630
  
Biological name :mkrn2
  
Synonyms : makorin, ring finger protein, 2 / mkrn2
  
Possible biological names infered from orthology : Probable E3 ubiquitin-protein ligase makorin-2 / Q9ERV1 / Q9H000
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 543365
Gene end: 575786
  
Corresponding Affymetrix probe sets: Dr.1652.2.S1_a_at (Zebrafish Array)   NM_152979_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000110314
Ensembl peptide - ENSDARP00000143949
Ensembl peptide - ENSDARP00000016210
NCBI entrez gene - 170783     See in Manteia.
RefSeq - NM_152979
RefSeq - XM_005155668
RefSeq Peptide - NP_694511
swissprot - A0A0R4I9G0
ZFIN ID - ZDB-GENE-020213-2
Ensembl - ENSDARG00000007630
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MKRN2ENSGALG00000004991Gallus gallus
 MKRN2ENSG00000075975Homo sapiens
 Mkrn2ENSMUSG00000000439Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mkrn1 / Q4VBT5 / makorin, ring finger protein, 1 / MKRN3* / Q9UHC7* / Q13064* / Q60764* / Q9QXP6* / makorin ring finger protein 3* / Probable E3 ubiquitin-protein ligase makorin-3 *ENSDARG0000004166539
mkrn4 / makorin, ring finger protein, 4ENSDARG0000002829522


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR018957  Zinc finger, C3HC4 RING-type
 IPR026293  Probable E3 ubiquitin-protein ligase makorin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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