ENSDARG00000028517


Danio rerio

Features
Gene ID: ENSDARG00000028517
  
Biological name :hbp1
  
Synonyms : hbp1 / HMG-box transcription factor 1
  
Possible biological names infered from orthology : O60381
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 3449959
Gene end: 3470910
  
Corresponding Affymetrix probe sets: Dr.22831.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000039092
Ensembl peptide - ENSDARP00000148354
Ensembl peptide - ENSDARP00000152088
NCBI entrez gene - 554137     See in Manteia.
RefSeq - NM_001024431
RefSeq Peptide - NP_001019602
swissprot - F1QK54
ZFIN ID - ZDB-GENE-050522-414
Ensembl - ENSDARG00000028517
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HBP1ENSGALG00000008050Gallus gallus
 HBP1ENSG00000105856Homo sapiens
 Hbp1ENSMUSG00000002996Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003652  Ataxin, AXH domain
 IPR009071  High mobility group box domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr