ENSMUSG00000002996


Mus musculus

Features
Gene ID: ENSMUSG00000002996
  
Biological name :Hbp1
  
Synonyms : Hbp1 / HMG-box transcription factor 1
  
Possible biological names infered from orthology : O60381
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: A3
Gene start: 31926254
Gene end: 31950535
  
Corresponding Affymetrix probe sets: 10399897 (MoGene1.0st)   1432143_a_at (Mouse Genome 430 2.0 Array)   1446269_at (Mouse Genome 430 2.0 Array)   1460367_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000135508
Ensembl peptide - ENSMUSP00000135489
Ensembl peptide - ENSMUSP00000135537
Ensembl peptide - ENSMUSP00000131158
Ensembl peptide - ENSMUSP00000131983
Ensembl peptide - ENSMUSP00000135080
Ensembl peptide - ENSMUSP00000135155
NCBI entrez gene - 73389     See in Manteia.
MGI - MGI:894659
RefSeq - XM_017315212
RefSeq - NM_153198
RefSeq - NM_177993
RefSeq - XM_006515227
RefSeq - XM_006515228
RefSeq - XM_006515229
RefSeq Peptide - NP_694878
RefSeq Peptide - NP_818774
swissprot - H3BJQ4
swissprot - H3BJW8
swissprot - H3BKQ9
swissprot - H3BKS6
swissprot - E9Q469
swissprot - H3BKV0
swissprot - E9Q1A8
Ensembl - ENSMUSG00000002996
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hbp1ENSDARG00000028517Danio rerio
 HBP1ENSGALG00000008050Gallus gallus
 HBP1ENSG00000105856Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003652  Ataxin, AXH domain
 IPR009071  High mobility group box domain
 IPR036096  Ataxin, AXH domain superfamily
 IPR036910  High mobility group box domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr