ENSG00000105856


Homo sapiens

Features
Gene ID: ENSG00000105856
  
Biological name :HBP1
  
Synonyms : HBP1 / HMG-box transcription factor 1 / O60381
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q22.3
Gene start: 107168961
Gene end: 107202529
  
Corresponding Affymetrix probe sets: 207361_at (Human Genome U133 Plus 2.0 Array)   209102_s_at (Human Genome U133 Plus 2.0 Array)   236645_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000418017
Ensembl peptide - ENSP00000475809
Ensembl peptide - ENSP00000420500
Ensembl peptide - ENSP00000420281
Ensembl peptide - ENSP00000420137
Ensembl peptide - ENSP00000419143
Ensembl peptide - ENSP00000418738
Ensembl peptide - ENSP00000418022
Ensembl peptide - ENSP00000222574
Ensembl peptide - ENSP00000417631
Ensembl peptide - ENSP00000417927
NCBI entrez gene - 26959     See in Manteia.
OMIM - 616714
RefSeq - XM_017011967
RefSeq - NM_001244262
RefSeq - NM_012257
RefSeq - XM_005250266
RefSeq - XM_005250267
RefSeq Peptide - NP_036389
RefSeq Peptide - NP_001231191
swissprot - H7C574
swissprot - U3KQE5
swissprot - C9JQU7
swissprot - O60381
swissprot - C9JAW1
swissprot - C9J8V6
swissprot - C9J5U3
swissprot - C9JPK6
swissprot - A0A024R722
swissprot - H7C4S2
Ensembl - ENSG00000105856
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hbp1ENSDARG00000028517Danio rerio
 HBP1ENSGALG00000008050Gallus gallus
 Hbp1ENSMUSG00000002996Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003652  Ataxin, AXH domain
 IPR009071  High mobility group box domain
 IPR036096  Ataxin, AXH domain superfamily
 IPR036910  High mobility group box domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007050 cell cycle arrest NAS
 biological_processGO:0016055 Wnt signaling pathway IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0016607 nuclear speck IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr