ENSDARG00000028900


Danio rerio

Features
Gene ID: ENSDARG00000028900
  
Biological name :odf2a
  
Synonyms : odf2a / outer dense fiber of sperm tails 2a
  
Possible biological names infered from orthology : A3KGV1 / Mus musculus outer dense fiber of sperm tails 2 (Odf2), transcript variant 6, mRNA. / ODF2 / outer dense fiber of sperm tails 2 / Q5BJF6
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 13127742
Gene end: 13148318
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000075867
Ensembl peptide - ENSDARP00000143495
NCBI entrez gene - 792921     See in Manteia.
swissprot - E7F186
ZFIN ID - ZDB-GENE-091117-46
Ensembl - ENSDARG00000028900
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ODF2ENSGALG00000004767Gallus gallus
 ODF2ENSG00000136811Homo sapiens
 Odf2ENSMUSG00000026790Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
odf2b / outer dense fiber of sperm tails 2b / ODF2* / Q5BJF6* / A3KGV1* / outer dense fiber of sperm tails 2* / Mus musculus outer dense fiber of sperm tails 2 (Odf2), transcript variant 6, mRNA.*ENSDARG0000002070248


Protein motifs (from Interpro)
Interpro ID Name
 IPR000589  Ribosomal protein S15
 IPR026099  Outer dense fibre protein 2-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
Regulation of PLK1 Activity at G2/M Transition
Loss of Nlp from mitotic centrosomes
Recruitment of mitotic centrosome proteins and complexes
Loss of proteins required for interphase microtubule organization from the centrosome
Recruitment of NuMA to mitotic centrosomes
Anchoring of the basal body to the plasma membrane
AURKA Activation by TPX2


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000152 retina retina decreased size , abnormal
retina has fewer parts of type retina cell, abnormal
retina mitotic cell cycle increased occurrence , abnormal
retina mitotic M phase increased duration , abnormal
retina mitotic prometaphase arrested , abnormal
retina mitotic prometaphase increased duration , abnormal
retina mitotic cell cycle arrested , abnormal
retina mitotic cell cycle increased duration , abnormal
retina M phase increased duration , abnormal
retina cell division increased duration , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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