ENSGALG00000004767


Gallus gallus

Features
Gene ID: ENSGALG00000004767
  
Biological name :ODF2
  
Synonyms : ODF2 / outer dense fiber protein 2
  
Possible biological names infered from orthology : A3KGV1 / Mus musculus outer dense fiber of sperm tails 2 (Odf2), transcript variant 6, mRNA. / outer dense fiber of sperm tails 2 / Q5BJF6
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 5648047
Gene end: 5666048
  
Corresponding Affymetrix probe sets: Gga.13300.1.S1_at (Chicken Array)   Gga.17340.1.S1_at (Chicken Array)   Gga.17340.1.S1_x_at (Chicken Array)   GgaAffx.12182.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007591
Ensembl peptide - ENSGALP00000053230
NCBI entrez gene - 417213     See in Manteia.
RefSeq - XM_015279490
RefSeq - NM_001012799
RefSeq - XM_015279488
RefSeq - XM_015279489
RefSeq Peptide - NP_001012817
swissprot - E1BSP2
swissprot - A0A1D5PK76
Ensembl - ENSGALG00000004767
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 odf2aENSDARG00000028900Danio rerio
 odf2bENSDARG00000020702Danio rerio
 ODF2ENSG00000136811Homo sapiens
 Odf2ENSMUSG00000026790Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ODF2L / outer dense fiber of sperm tails 2 like / Q9D478* / Q9ULJ1* / Outer dense fiber protein 2-like *ENSGALG0000000680420


Protein motifs (from Interpro)
Interpro ID Name
 IPR026099  Outer dense fibre protein 2-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008104 protein localization IEA
 biological_processGO:0010457 centriole-centriole cohesion IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0097539 ciliary transition fiber IEA
 cellular_componentGO:0120103 centriolar subdistal appendage IEA


Pathways (from Reactome)
Pathway description
Regulation of PLK1 Activity at G2/M Transition
Loss of Nlp from mitotic centrosomes
Recruitment of mitotic centrosome proteins and complexes
Loss of proteins required for interphase microtubule organization from the centrosome
Recruitment of NuMA to mitotic centrosomes
Anchoring of the basal body to the plasma membrane
AURKA Activation by TPX2


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr