ENSDARG00000029168


Danio rerio

Features
Gene ID: ENSDARG00000029168
  
Biological name :ppfibp2b
  
Synonyms : ppfibp2b / PTPRF interacting protein, binding protein 2b (liprin beta 2)
  
Possible biological names infered from orthology : O35711 / PPFIA binding protein 2 / PPFIBP2 / PTPRF interacting protein, binding protein 2 (liprin beta 2) / Q8ND30
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 15933411
Gene end: 16042941
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000083468
Ensembl peptide - ENSDARP00000110323
Ensembl peptide - ENSDARP00000153470
Ensembl peptide - ENSDARP00000120138
Ensembl peptide - ENSDARP00000119821
NCBI entrez gene - 100003048     See in Manteia.
NCBI entrez gene - 436635     See in Manteia.
RefSeq - NM_001002362
RefSeq - NM_001326598
RefSeq Peptide - NP_001002362
RefSeq Peptide - NP_001313527
swissprot - A2CET5
swissprot - A2CET4
swissprot - A2CET3
swissprot - F1QB48
ZFIN ID - ZDB-GENE-040718-54
Ensembl - ENSDARG00000029168
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPFIBP2ENSGALG00000005294Gallus gallus
 Q8ND30ENSG00000166387Homo sapiens
 O35711ENSMUSG00000036528Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ppfibp1b / PTPRF interacting protein, binding protein 1b (liprin beta 1) / Q86W92* / PPFIBP1* / PPFIA binding protein 1*ENSDARG0000010005753
ppfibp1a / PTPRF interacting protein, binding protein 1a (liprin beta 1) / Q86W92* / Q8C8U0* / PPFIBP1* / PPFIA binding protein 1* / PTPRF interacting protein, binding protein 1 (liprin beta 1)*ENSDARG0000004574950
ppfibp2a / PTPRF interacting protein, binding protein 2a (liprin beta 2) / O35711* / Q8ND30* / PPFIBP2* / PPFIA binding protein 2* / PTPRF interacting protein, binding protein 2 (liprin beta 2)*ENSDARG0000006197741
ppfia2 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 / O75334* / PTPRF interacting protein alpha 2*ENSDARG0000001300023
ppfia3 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 / O75145* / P60469* / PTPRF interacting protein alpha 3*ENSDARG0000007705321
ppfia4 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 / O75335* / PTPRF interacting protein alpha 4*ENSDARG0000005320521
ppfia1 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 / Q13136* / PTPRF interacting protein alpha 1*ENSDARG0000009867418
kazna / A9C3W3 / kazrin, periplakin interacting protein a / KAZN* / Q69ZS8* / Q674X7* / Kazrin * / kazrin, periplakin interacting protein*ENSDARG0000007692311
kaznb / kazrin, periplakin interacting protein b / KAZN* / Q69ZS8* / Q674X7* / Kazrin * / kazrin, periplakin interacting protein*ENSDARG000000066019


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR003112  Olfactomedin-like domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR029515  LAR-interacting protein, Liprin
 IPR030435  Liprin-beta-2
 IPR031229  Olfactomedin-like protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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