ENSDARG00000100057


Danio rerio

Features
Gene ID: ENSDARG00000100057
  
Biological name :ppfibp1b
  
Synonyms : ppfibp1b / PTPRF interacting protein, binding protein 1b (liprin beta 1)
  
Possible biological names infered from orthology : PPFIA binding protein 1 / PPFIBP1 / PTPRF interacting protein, binding protein 1 (liprin beta 1) / Q86W92 / Q8C8U0
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 15469015
Gene end: 15551456
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130515
Ensembl peptide - ENSDARP00000141577
Ensembl peptide - ENSDARP00000138313
NCBI entrez gene - 561961     See in Manteia.
RefSeq - NM_001044970
RefSeq Peptide - NP_001038435
swissprot - B7ZVC4
swissprot - A0A0J9YJG7
swissprot - Q1LUM4
ZFIN ID - ZDB-GENE-060503-47
Ensembl - ENSDARG00000100057
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPFIBP1ENSGALG00000014106Gallus gallus
 Q86W92ENSG00000110841Homo sapiens
 Q8C8U0ENSMUSG00000016487Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ppfibp1a / PTPRF interacting protein, binding protein 1a (liprin beta 1) / Q86W92* / Q8C8U0* / PPFIBP1* / PPFIA binding protein 1* / PTPRF interacting protein, binding protein 1 (liprin beta 1)*ENSDARG0000004574955
ppfibp2a / PTPRF interacting protein, binding protein 2a (liprin beta 2) / O35711* / Q8ND30* / PPFIBP2* / PPFIA binding protein 2* / PTPRF interacting protein, binding protein 2 (liprin beta 2)*ENSDARG0000006197735
ppfia2 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 / O75334* / PTPRF interacting protein alpha 2*ENSDARG0000001300020
ppfia3 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 / O75145* / P60469* / PTPRF interacting protein alpha 3*ENSDARG0000007705320
ppfia4 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 / O75335* / PTPRF interacting protein alpha 4*ENSDARG0000005320519
kazna / A9C3W3 / kazrin, periplakin interacting protein a / KAZN* / Q69ZS8* / Q674X7* / Kazrin * / kazrin, periplakin interacting protein*ENSDARG0000007692315
ppfibp2b / PTPRF interacting protein, binding protein 2b (liprin beta 2) / O35711* / Q8ND30* / PPFIBP2* / PPFIA binding protein 2* / PTPRF interacting protein, binding protein 2 (liprin beta 2)*ENSDARG0000002916813
ppfia1 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 / Q13136* / PTPRF interacting protein alpha 1*ENSDARG000000986746
kaznb / kazrin, periplakin interacting protein b / KAZN* / Q69ZS8* / Q674X7* / Kazrin * / kazrin, periplakin interacting protein*ENSDARG000000066015


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR029515  LAR-interacting protein, Liprin
 IPR030437  Liprin-beta-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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