ENSMUSG00000016487


Mus musculus

Features
Gene ID: ENSMUSG00000016487
  
Biological name :Ppfibp1
  
Synonyms : Ppfibp1 / PTPRF interacting protein, binding protein 1 (liprin beta 1) / Q8C8U0
  
Possible biological names infered from orthology : PPFIA binding protein 1 / Q86W92
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: G3
Gene start: 146888487
Gene end: 147032025
  
Corresponding Affymetrix probe sets: 10542791 (MoGene1.0st)   1443029_at (Mouse Genome 430 2.0 Array)   1445577_at (Mouse Genome 430 2.0 Array)   1452759_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000144887
Ensembl peptide - ENSMUSP00000122515
Ensembl peptide - ENSMUSP00000145088
Ensembl peptide - ENSMUSP00000016631
Ensembl peptide - ENSMUSP00000107250
Ensembl peptide - ENSMUSP00000114340
Ensembl peptide - ENSMUSP00000121270
NCBI entrez gene - 67533     See in Manteia.
MGI - MGI:1914783
RefSeq - XM_017321719
RefSeq - XM_006507101
RefSeq - XM_006507102
RefSeq - XM_006507103
RefSeq - XM_011241624
RefSeq - XM_011241625
RefSeq - XM_011241626
RefSeq - XM_011241627
RefSeq - XM_011241628
RefSeq - XM_011241629
RefSeq - NM_001170433
RefSeq - NM_001355729
RefSeq - NM_026221
RefSeq - XM_006507095
RefSeq - XM_006507096
RefSeq - XM_006507097
RefSeq - XM_006507098
RefSeq - XM_006507099
RefSeq Peptide - NP_001342658
RefSeq Peptide - NP_080497
RefSeq Peptide - NP_001163904
swissprot - A0A0N4SVG3
swissprot - F6S1C4
swissprot - Q8C8U0
swissprot - A0A0N4SUZ5
swissprot - F6YZ95
swissprot - F7CUU8
Ensembl - ENSMUSG00000016487
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ppfibp1aENSDARG00000045749Danio rerio
 ppfibp1bENSDARG00000100057Danio rerio
 PPFIBP1ENSGALG00000014106Gallus gallus
 Q86W92ENSG00000110841Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O35711 / Ppfibp2 / PTPRF interacting protein, binding protein 2 (liprin beta 2) / Q8ND30* / PPFIA binding protein 2*ENSMUSG0000003652845
Ppfia2 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 / O75334* / PTPRF interacting protein alpha 2*ENSMUSG0000005382522
Ppfia1 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 / Q13136* / PTPRF interacting protein alpha 1*ENSMUSG0000003751922
Ppfia4 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 / O75335* / PTPRF interacting protein alpha 4*ENSMUSG0000002645822
P60469 / Ppfia3 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 / O75145* / PTPRF interacting protein alpha 3*ENSMUSG0000000386321
Kazn / Q69ZS8 / Kazrin / Q674X7* / kazrin, periplakin interacting protein*ENSMUSG000000406065


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR029515  LAR-interacting protein, Liprin
 IPR030437  Liprin-beta-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000013236 Ptprs / B0V2N1 / Receptor-type tyrosine-protein phosphatase S / Q13332* / protein tyrosine phosphatase, receptor type S*  / complex / reaction
 ENSMUSG00000028399 Ptprd / Q64487 / protein tyrosine phosphatase, receptor type, D / P23468*  / complex / reaction
 ENSMUSG00000033295 Ptprf / A2A8L5 / Receptor-type tyrosine-protein phosphatase F / P10586* / protein tyrosine phosphatase, receptor type F*  / complex / reaction






 

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