ENSG00000110841


Homo sapiens

Features
Gene ID: ENSG00000110841
  
Biological name :PPFIBP1
  
Synonyms : PPFIA binding protein 1 / PPFIBP1 / Q86W92
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: p11.23
Gene start: 27523431
Gene end: 27695564
  
Corresponding Affymetrix probe sets: 1569464_at (Human Genome U133 Plus 2.0 Array)   203735_x_at (Human Genome U133 Plus 2.0 Array)   203736_s_at (Human Genome U133 Plus 2.0 Array)   214374_s_at (Human Genome U133 Plus 2.0 Array)   214375_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000445132
Ensembl peptide - ENSP00000444304
Ensembl peptide - ENSP00000445425
Ensembl peptide - ENSP00000479763
Ensembl peptide - ENSP00000445822
Ensembl peptide - ENSP00000228425
Ensembl peptide - ENSP00000314724
Ensembl peptide - ENSP00000437438
Ensembl peptide - ENSP00000438036
Ensembl peptide - ENSP00000438174
Ensembl peptide - ENSP00000442462
Ensembl peptide - ENSP00000443324
Ensembl peptide - ENSP00000443442
Ensembl peptide - ENSP00000444046
NCBI entrez gene - 8496     See in Manteia.
OMIM - 603141
RefSeq - XM_017020076
RefSeq - XM_017020061
RefSeq - XM_017020062
RefSeq - XM_017020063
RefSeq - XM_017020064
RefSeq - XM_017020065
RefSeq - XM_017020066
RefSeq - XM_017020067
RefSeq - XM_017020068
RefSeq - XM_017020069
RefSeq - XM_017020070
RefSeq - XM_017020071
RefSeq - XM_017020072
RefSeq - XM_017020073
RefSeq - XM_017020074
RefSeq - XM_017020075
RefSeq - NM_001198915
RefSeq - NM_001198916
RefSeq - NM_003622
RefSeq - NM_177444
RefSeq - XM_005253505
RefSeq - XM_005253507
RefSeq - XM_005253508
RefSeq - XM_005253509
RefSeq - XM_006719159
RefSeq - XM_017020056
RefSeq - XM_017020057
RefSeq - XM_017020058
RefSeq - XM_017020059
RefSeq - XM_017020060
RefSeq Peptide - NP_003613
RefSeq Peptide - NP_803193
RefSeq Peptide - NP_001185844
RefSeq Peptide - NP_001185845
swissprot - F5H495
swissprot - F5H6Q7
swissprot - F5H7K5
swissprot - A0A0A0MTP2
swissprot - H0YGH8
swissprot - Q86W92
swissprot - A0A024RB02
swissprot - H0YFE4
swissprot - A0A087WVX8
swissprot - F5GZP6
swissprot - F5H0E0
Ensembl - ENSG00000110841
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ppfibp1aENSDARG00000045749Danio rerio
 ppfibp1bENSDARG00000100057Danio rerio
 PPFIBP1ENSGALG00000014106Gallus gallus
 Q8C8U0ENSMUSG00000016487Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8ND30 / PPFIBP2 / PPFIA binding protein 2ENSG0000016638743
O75335 / PPFIA4 / PTPRF interacting protein alpha 4ENSG0000014384722
PPFIA1 / Q13136 / PTPRF interacting protein alpha 1ENSG0000013162621
O75334 / PPFIA2 / PTPRF interacting protein alpha 2ENSG0000013922021
O75145 / PPFIA3 / PTPRF interacting protein alpha 3ENSG0000017738021
KAZN / Q674X7 / kazrin, periplakin interacting proteinENSG0000018933716


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR029515  LAR-interacting protein, Liprin
 IPR030437  Liprin-beta-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane NAS
 cellular_componentGO:0005925 focal adhesion HDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000142949 PTPRF / P10586 / protein tyrosine phosphatase, receptor type F  / reaction / complex
 ENSG00000153707 PTPRD / P23468 / protein tyrosine phosphatase, receptor type D  / complex / reaction
 ENSG00000105426 PTPRS / Q13332 / protein tyrosine phosphatase, receptor type S  / reaction / complex






 

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contact: otassy@igbmc.fr