ENSDARG00000045749


Danio rerio

Features
Gene ID: ENSDARG00000045749
  
Biological name :ppfibp1a
  
Synonyms : ppfibp1a / PTPRF interacting protein, binding protein 1a (liprin beta 1)
  
Possible biological names infered from orthology : PPFIA binding protein 1 / PPFIBP1 / PTPRF interacting protein, binding protein 1 (liprin beta 1) / Q86W92 / Q8C8U0
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 10811490
Gene end: 10835620
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067255
Ensembl peptide - ENSDARP00000125581
Ensembl peptide - ENSDARP00000131924
NCBI entrez gene - 565020     See in Manteia.
RefSeq - NM_001045067
RefSeq Peptide - NP_001038532
swissprot - H0WFE9
swissprot - A0A0J9YJ57
swissprot - Q5RG05
ZFIN ID - ZDB-GENE-041210-298
Ensembl - ENSDARG00000045749
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPFIBP1ENSGALG00000014106Gallus gallus
 Q86W92ENSG00000110841Homo sapiens
 Q8C8U0ENSMUSG00000016487Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ppfibp1b / PTPRF interacting protein, binding protein 1b (liprin beta 1) / Q86W92* / PPFIBP1* / PPFIA binding protein 1*ENSDARG0000010005764
ppfibp2a / PTPRF interacting protein, binding protein 2a (liprin beta 2) / O35711* / Q8ND30* / PPFIBP2* / PPFIA binding protein 2* / PTPRF interacting protein, binding protein 2 (liprin beta 2)*ENSDARG0000006197736
ppfia4 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 / O75335* / PTPRF interacting protein alpha 4*ENSDARG0000005320522
ppfia2 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 / O75334* / PTPRF interacting protein alpha 2*ENSDARG0000001300022
ppfia3 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 / O75145* / P60469* / PTPRF interacting protein alpha 3*ENSDARG0000007705321
kazna / A9C3W3 / kazrin, periplakin interacting protein a / KAZN* / Q69ZS8* / Q674X7* / Kazrin * / kazrin, periplakin interacting protein*ENSDARG0000007692316
ppfibp2b / PTPRF interacting protein, binding protein 2b (liprin beta 2) / O35711* / Q8ND30* / PPFIBP2* / PPFIA binding protein 2* / PTPRF interacting protein, binding protein 2 (liprin beta 2)*ENSDARG0000002916814
ppfia1 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 / Q13136* / PTPRF interacting protein alpha 1*ENSDARG000000986747
kaznb / kazrin, periplakin interacting protein b / KAZN* / Q69ZS8* / Q674X7* / Kazrin * / kazrin, periplakin interacting protein*ENSDARG000000066015


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR029515  LAR-interacting protein, Liprin
 IPR030437  Liprin-beta-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr