ENSGALG00000014106


Gallus gallus

Features
Gene ID: ENSGALG00000014106
  
Biological name :PPFIBP1
  
Synonyms : liprin-beta-1 / PPFIBP1
  
Possible biological names infered from orthology : PPFIA binding protein 1 / PTPRF interacting protein, binding protein 1 (liprin beta 1) / Q86W92 / Q8C8U0
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 68253314
Gene end: 68353004
  
Corresponding Affymetrix probe sets: Gga.12993.1.S1_at (Chicken Array)   Gga.16250.1.S1_a_at (Chicken Array)   Gga.4727.1.S1_at (Chicken Array)   GgaAffx.8949.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022797
Ensembl peptide - ENSGALP00000022796
NCBI entrez gene - 418219     See in Manteia.
RefSeq - XM_015290424
RefSeq - XM_015290411
RefSeq - XM_015290418
RefSeq - XM_015290421
RefSeq - NM_001030771
RefSeq - XM_015290333
RefSeq - XM_015290335
RefSeq - XM_015290341
RefSeq - XM_015290347
RefSeq - XM_015290353
RefSeq - XM_015290358
RefSeq - XM_015290361
RefSeq - XM_015290366
RefSeq - XM_015290370
RefSeq - XM_015290372
RefSeq - XM_015290381
RefSeq - XM_015290382
RefSeq - XM_015290387
RefSeq - XM_015290389
RefSeq - XM_015290396
RefSeq - XM_015290398
RefSeq - XM_015290403
RefSeq - XM_015290406
RefSeq Peptide - NP_001025942
swissprot - F1P199
swissprot - E1C1C3
Ensembl - ENSGALG00000014106
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ppfibp1aENSDARG00000045749Danio rerio
 ppfibp1bENSDARG00000100057Danio rerio
 Q86W92ENSG00000110841Homo sapiens
 Q8C8U0ENSMUSG00000016487Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PPFIBP2 / PPFIA binding protein 2 / O35711* / Q8ND30* / PTPRF interacting protein, binding protein 2 (liprin beta 2)*ENSGALG0000000529444
PPFIA2 / PTPRF interacting protein alpha 2 / O75334* / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2*ENSGALG0000001095822
PPFIA4 / PTPRF interacting protein alpha 4 / O75335* / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4*ENSGALG0000000021721
PPFIA1 / PTPRF interacting protein alpha 1 / Q13136* / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1*ENSGALG0000003577421
KAZN / kazrin, periplakin interacting protein / Q674X7* / Q69ZS8* / Kazrin *ENSGALG000000136425


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR029515  LAR-interacting protein, Liprin
 IPR030437  Liprin-beta-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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