ENSGALG00000035774


Gallus gallus

Features
Gene ID: ENSGALG00000035774
  
Biological name :PPFIA1
  
Synonyms : PPFIA1 / PTPRF interacting protein alpha 1
  
Possible biological names infered from orthology : protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 / Q13136
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 17837266
Gene end: 17884273
  
Corresponding Affymetrix probe sets: Gga.12241.1.S1_at (Chicken Array)   Gga.12241.1.S1_s_at (Chicken Array)   Gga.13097.1.S1_s_at (Chicken Array)   Gga.17426.1.S1_at (Chicken Array)   Gga.18296.1.A1_at (Chicken Array)   Gga.18296.1.S1_at (Chicken Array)   GgaAffx.20247.1.S1_s_at (Chicken Array)   GgaAffx.26244.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044618
Ensembl peptide - ENSGALP00000058449
Ensembl peptide - ENSGALP00000055654
Ensembl peptide - ENSGALP00000054058
Ensembl peptide - ENSGALP00000046369
Ensembl peptide - ENSGALP00000044753
NCBI entrez gene - 423147     See in Manteia.
RefSeq - XM_015286879
RefSeq - XM_015286873
RefSeq - XM_015286874
RefSeq - XM_015286875
RefSeq - XM_015286876
RefSeq - XM_015286877
RefSeq - XM_015286878
RefSeq - XM_015286872
swissprot - A0A1D5PRX5
swissprot - A0A1D5PMI0
swissprot - A0A1D5P138
swissprot - A0A1D5NWL3
swissprot - A0A1D5NW82
swissprot - A0A1D5PZN5
Ensembl - ENSGALG00000035774
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ppfia1ENSDARG00000098674Danio rerio
 PPFIA1ENSG00000131626Homo sapiens
 Ppfia1ENSMUSG00000037519Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PPFIA2 / PTPRF interacting protein alpha 2 / O75334* / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2*ENSGALG0000001095868
PPFIA4 / PTPRF interacting protein alpha 4 / O75335* / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4*ENSGALG0000000021768
PPFIBP2 / PPFIA binding protein 2 / O35711* / Q8ND30* / PTPRF interacting protein, binding protein 2 (liprin beta 2)*ENSGALG0000000529418
PPFIBP1 / liprin-beta-1 / Q86W92* / Q8C8U0* / PPFIA binding protein 1* / PTPRF interacting protein, binding protein 1 (liprin beta 1)*ENSGALG0000001410617
KAZN / kazrin, periplakin interacting protein / Q674X7* / Q69ZS8* / Kazrin *ENSGALG000000136429


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR029515  LAR-interacting protein, Liprin
 IPR030438  Liprin-alpha-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051497 negative regulation of stress fiber assembly IEA
 biological_processGO:1903077 negative regulation of protein localization to plasma membrane IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005925 focal adhesion IEA


Pathways (from Reactome)
Pathway description
Norepinephrine Neurotransmitter Release Cycle
Glutamate Neurotransmitter Release Cycle
Acetylcholine Neurotransmitter Release Cycle
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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