ENSDARG00000029500


Danio rerio

Features
Gene ID: ENSDARG00000029500
  
Biological name :rpl34
  
Synonyms : Q7ZWJ7 / ribosomal protein L34 / rpl34
  
Possible biological names infered from orthology : 60S ribosomal protein L34 / P49207 / Q9D1R9
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 59649399
Gene end: 59664545
  
Corresponding Affymetrix probe sets: Dr.15867.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000040770
Ensembl peptide - ENSDARP00000108075
Ensembl peptide - ENSDARP00000155419
NCBI entrez gene - 394097     See in Manteia.
RefSeq - XM_005166535
RefSeq Peptide - NP_957416
swissprot - Q7ZWJ7
ZFIN ID - ZDB-GENE-040426-1033
Ensembl - ENSDARG00000029500
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPL34ENSGALG00000032002Gallus gallus
 RPL34ENSG00000109475Homo sapiens
 Rpl34ENSMUSG00000062006Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008195  Ribosomal protein L34Ae
 IPR018065  Ribosomal protein L34e, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IBA
 biological_processGO:0042254 ribosome biogenesis IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
SRP-dependent cotranslational protein targeting to membrane
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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