ENSMUSG00000062006


Mus musculus

Features
Gene ID: ENSMUSG00000062006
  
Biological name :Rpl34
  
Synonyms : 60S ribosomal protein L34 / Q9D1R9 / Rpl34
  
Possible biological names infered from orthology : P49207 / ribosomal protein L34
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: G3
Gene start: 130726831
Gene end: 130730398
  
Corresponding Affymetrix probe sets: 10407319 (MoGene1.0st)   10502196 (MoGene1.0st)   10514173 (MoGene1.0st)   10524018 (MoGene1.0st)   10538963 (MoGene1.0st)   1427875_a_at (Mouse Genome 430 2.0 Array)   1438655_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000078092
Ensembl peptide - ENSMUSP00000086614
Ensembl peptide - ENSMUSP00000142486
Ensembl peptide - ENSMUSP00000143752
Ensembl peptide - ENSMUSP00000142951
NCBI entrez gene - 100043876     See in Manteia.
NCBI entrez gene - 619547     See in Manteia.
NCBI entrez gene - 68436     See in Manteia.
MGI - MGI:1915686
RefSeq - NM_001287581
RefSeq - NM_026724
RefSeq - NM_001005859
RefSeq Peptide - NP_001186279
RefSeq Peptide - NP_081000
RefSeq Peptide - NP_001005859
RefSeq Peptide - NP_001274510
swissprot - Q9D1R9
swissprot - A0A0G2JEY6
swissprot - A0A0G2JGY8
Ensembl - ENSMUSG00000062006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl34ENSDARG00000029500Danio rerio
 RPL34ENSGALG00000032002Gallus gallus
 RPL34ENSG00000109475Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008195  Ribosomal protein L34Ae
 IPR018065  Ribosomal protein L34e, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0042254 ribosome biogenesis IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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