ENSG00000109475


Homo sapiens

Features
Gene ID: ENSG00000109475
  
Biological name :RPL34
  
Synonyms : P49207 / ribosomal protein L34 / RPL34
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q25
Gene start: 108620566
Gene end: 108630412
  
Corresponding Affymetrix probe sets: 200026_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000378160
Ensembl peptide - ENSP00000378163
Ensembl peptide - ENSP00000423316
Ensembl peptide - ENSP00000423983
Ensembl peptide - ENSP00000378162
NCBI entrez gene - 6164     See in Manteia.
OMIM - 616862
RefSeq - NM_001319234
RefSeq - NM_000995
RefSeq - NM_001319232
RefSeq - NM_001319235
RefSeq - NM_001319236
RefSeq - NM_033625
RefSeq Peptide - NP_296374
RefSeq Peptide - NP_000986
RefSeq Peptide - NP_001306161
RefSeq Peptide - NP_001306163
RefSeq Peptide - NP_001306164
RefSeq Peptide - NP_001306165
swissprot - P49207
swissprot - A0A024RDH8
Ensembl - ENSG00000109475
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl34ENSDARG00000029500Danio rerio
 RPL34ENSGALG00000032002Gallus gallus
 Rpl34ENSMUSG00000062006Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008195  Ribosomal protein L34Ae
 IPR018065  Ribosomal protein L34e, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006412 translation IBA
 biological_processGO:0006413 translational initiation TAS
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane TAS
 biological_processGO:0019083 viral transcription TAS
 biological_processGO:0042254 ribosome biogenesis IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0003735 structural constituent of ribosome TAS
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Peptide chain elongation
SRP-dependent cotranslational protein targeting to membrane
Viral mRNA Translation
Selenocysteine synthesis
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Eukaryotic Translation Termination
Regulation of expression of SLITs and ROBOs
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr