ENSDARG00000030020


Danio rerio

Features
Gene ID: ENSDARG00000030020
  
Biological name :agfg1a
  
Synonyms : agfg1a / ArfGAP with FG repeats 1a
  
Possible biological names infered from orthology : AGFG1 / Arf-GAP domain and FG repeat-containing protein 1 / ArfGAP with FG repeats 1 / P52594 / Q8K2K6
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 35156414
Gene end: 35212462
  
Corresponding Affymetrix probe sets: Dr.1483.1.S1_at (Zebrafish Array)   NM_199835_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000117201
Ensembl peptide - ENSDARP00000043959
NCBI entrez gene - 327597     See in Manteia.
RefSeq - NM_199835
RefSeq Peptide - NP_956129
swissprot - F1R9R7
swissprot - F1QPM2
ZFIN ID - ZDB-GENE-030131-5808
Ensembl - ENSDARG00000030020
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AGFG1ENSGALG00000003052Gallus gallus
 AGFG1ENSG00000173744Homo sapiens
 Agfg1ENSMUSG00000026159Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
agfg1b / ArfGAP with FG repeats 1b / AGFG1* / P52594* / Q8K2K6* / ArfGAP with FG repeats 1* / Arf-GAP domain and FG repeat-containing protein 1 *ENSDARG0000001952654
zgc:114045 / AGFG2* / O95081* / Q80WC7* / ArfGAP with FG repeats 2* / Arf-GAP domain and FG repeat-containing protein 2 *ENSDARG0000006933426


Protein motifs (from Interpro)
Interpro ID Name
 IPR001164  Arf GTPase activating protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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