ENSDARG00000030153


Danio rerio

Features
Gene ID: ENSDARG00000030153
  
Biological name :gnptab
  
Synonyms : gnptab / N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits / Q5RGJ8
  
Possible biological names infered from orthology : Q3T906 / Q69ZN6
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 17671164
Gene end: 17705108
  
Corresponding Affymetrix probe sets: Dr.7927.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000106477
Ensembl peptide - ENSDARP00000091928
Ensembl peptide - ENSDARP00000040444
NCBI entrez gene - 553365     See in Manteia.
RefSeq - NM_001044768
RefSeq - XM_005164744
RefSeq Peptide - NP_001038233
swissprot - G1K2J8
swissprot - F1QEV6
swissprot - Q5RGJ8
ZFIN ID - ZDB-GENE-030131-4714
Ensembl - ENSDARG00000030153
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GNPTABENSGALG00000012763Gallus gallus
 GNPTABENSG00000111670Homo sapiens
 GnptabENSMUSG00000035311Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000800  Notch domain
 IPR002048  EF-hand domain
 IPR010506  DMAP1-binding domain
 IPR018247  EF-Hand 1, calcium-binding site
 IPR021520  Stealth protein CR2, conserved region 2
 IPR031356  Stealth protein CR4, conserved region 4
 IPR031357  Stealth protein CR3, conserved region 3
 IPR031358  Stealth protein CR1, conserved region 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002063 chondrocyte development IMP
 biological_processGO:0007040 lysosome organization ISS
 biological_processGO:0016256 N-glycan processing to lysosome ISS
 biological_processGO:0046835 carbohydrate phosphorylation ISS
 biological_processGO:0048701 embryonic cranial skeleton morphogenesis IMP
 biological_processGO:0048703 embryonic viscerocranium morphogenesis IMP
 biological_processGO:0051216 cartilage development IMP
 biological_processGO:0060348 bone development IMP
 cellular_componentGO:0000139 Golgi membrane ISS
 cellular_componentGO:0005794 Golgi apparatus ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003976 UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity ISS
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016772 transferase activity, transferring phosphorus-containing groups IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000084 yolk yolk increased size , abnormal
Show

 ZFA:0000184 cleithrum cleithrum decreased amount , abnormal
Show

 ZFA:0000191 dentary dentary decreased amount , abnormal
Show

 ZFA:0000217 inner ear inner ear morphology , abnormal
Show

 ZFA:0000250 opercle opercle decreased amount , abnormal
Show

 ZFA:0000270 maxilla maxilla decreased amount , abnormal
Show

 ZFA:0000476 branchiostegal ray branchiostegal ray disorganized , abnormal
branchiostegal ray chondrocyte spheroid , abnormal
branchiostegal ray decreased amount , abnormal
Show

 ZFA:0000561 parasphenoid parasphenoid decreased amount , abnormal
Show

 ZFA:0000657 entopterygoid entopterygoid decreased amount , abnormal
Show

 ZFA:0000863 dermatocranium dermatocranium decreased amount , abnormal
dermatocranium ossification decreased occurrence , abnormal
dermatocranium amount , ameliorated
Show

 ZFA:0001094 whole organism whole organism lacks parts or has fewer parts of type pectoral fin , abnormal
Show

 ZFA:0001114 head head increased amount , abnormal
head decreased amount , abnormal
Show

 ZFA:0001205 Meckel s cartilage Meckels cartilage collagen type II trimer increased amount , abnormal
Meckels cartilage chondrocyte increased amount , abnormal
Meckels cartilage chondrocyte decreased amount , abnormal
Meckels cartilage Collagen increased amount , abnormal
Meckels cartilage chondrocyte disorganized , abnormal
Meckels cartilage increased amount , abnormal
Meckels cartilage decreased distance ceratohyal cartilage , abnormal
Meckels cartilage chondrocyte amount , ameliorated
Show

 ZFA:0001216 splanchnocranium splanchnocranium malformed , abnormal
splanchnocranium morphology , ameliorated
Show

 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton morphology , abnormal
mandibular arch skeleton decreased length , abnormal
mandibular arch skeleton flattened , abnormal
Show

 ZFA:0001273 ventral mandibular arch ventral mandibular arch malformed , abnormal
ventral mandibular arch retracted , abnormal
Show

 ZFA:0001321 neurocranial trabecula neurocranial trabecula collagen type II trimer increased amount , abnormal
Show

 ZFA:0001399 palatoquadrate cartilage palatoquadrate cartilage chondrocyte decreased amount , abnormal
palatoquadrate cartilage decreased length , abnormal
palatoquadrate cartilage increased amount , abnormal
palatoquadrate cartilage chondrocyte increased amount , abnormal
palatoquadrate cartilage chondrocyte amount , ameliorated
Show

 ZFA:0001400 ceratohyal cartilage ceratohyal cartilage chondrocyte increased amount , abnormal
ceratohyal cartilage chondrocyte decreased amount , abnormal
ceratohyal cartilage Collagen increased amount , abnormal
ceratohyal cartilage chondrocyte disorganized , abnormal
ceratohyal cartilage malformed , abnormal
ceratohyal cartilage increased amount , abnormal
ceratohyal cartilage increased angle to ceratohyal cartilage , abnormal
ceratohyal cartilage chondrocyte amount , ameliorated
Show

 ZFA:0001458 cranial cartilage cranial cartilage collagen type II trimer increased amount , abnormal
cranial cartilage chondrocyte increased size , abnormal
cranial cartilage chondrocyte development process quality , abnormal
cranial cartilage chondrocyte hyperplastic , abnormal
cranial cartilage increased amount , abnormal
cranial cartilage chondrocyte decreased amount , abnormal
cranial cartilage chondrocyte increased amount , abnormal
cranial cartilage amount , ameliorated
Show

 ZFA:0001580 neurocranium neurocranium blunt , abnormal
Show

 ZFA:0001591 endochondral bone endochondral bone ossification decreased occurrence , abnormal
Show

 ZFA:0001617 otolith otolith decreased size , abnormal
Show

 ZFA:0005509 palate palate increased amount , abnormal
Show

 ZFA:0009031 osteoblast osteoblast decreased amount , abnormal
Show

 ZFA:0009084 chondrocyte chondrocyte extracellular space mislocalised , abnormal
chondrocyte nucleus increased amount , abnormal
chondrocyte nucleus mislocalised , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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