ENSDARG00000030905


Danio rerio

Features
Gene ID: ENSDARG00000030905
  
Biological name :cited2
  
Synonyms : Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 / cited2
  
Possible biological names infered from orthology : Cbp/p300-interacting transactivator 2 / O35740 / Q99967
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 36915143
Gene end: 36917670
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000046715
NCBI entrez gene - 450024     See in Manteia.
RefSeq - NM_001006045
RefSeq Peptide - NP_001006045
swissprot - F1R408
ZFIN ID - ZDB-GENE-041010-141
Ensembl - ENSDARG00000030905
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CITED2ENSGALG00000013818Gallus gallus
 CITED2ENSG00000164442Homo sapiens
 Cited2ENSMUSG00000039910Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cited4a / Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a / Q9WUL8* / CITED4* / Q96RK1* / Cbp/p300-interacting transactivator 4 * / Cbp/p300 interacting t...ENSDARG0000003599039
cited4b / Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b / Q9WUL8* / CITED4* / Q96RK1* / Cbp/p300-interacting transactivator 4 * / Cbp/p300 interacting t...ENSDARG0000010100938
cited1 / Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 / P97769* / Q99966* / Cbp/p300-interacting transactivator 1 *ENSDARG0000007776924


Protein motifs (from Interpro)
Interpro ID Name
 IPR007576  CITED


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0032502 developmental process IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA


Pathways (from Reactome)
Pathway description
Regulation of gene expression by Hypoxia-inducible Factor
Activation of the TFAP2 (AP-2) family of transcription factors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr