ENSG00000164442


Homo sapiens

Features
Gene ID: ENSG00000164442
  
Biological name :CITED2
  
Synonyms : Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 / CITED2 / Q99967
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q24.1
Gene start: 139371807
Gene end: 139374620
  
Corresponding Affymetrix probe sets: 207980_s_at (Human Genome U133 Plus 2.0 Array)   209357_at (Human Genome U133 Plus 2.0 Array)   227287_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000356623
Ensembl peptide - ENSP00000479918
Ensembl peptide - ENSP00000444198
Ensembl peptide - ENSP00000442831
NCBI entrez gene - 10370     See in Manteia.
OMIM - 602937
RefSeq - NM_001168388
RefSeq - NM_001168389
RefSeq - NM_006079
RefSeq Peptide - NP_001161860
RefSeq Peptide - NP_006070
RefSeq Peptide - NP_001161861
swissprot - Q99967
swissprot - A0A0A0MTM3
swissprot - D9ZGF1
Ensembl - ENSG00000164442
  
Related genetic diseases (OMIM): 614431 - Ventricular septal defect 2, 614431
  614433 - Atrial septal defect 8, 614433
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cited2ENSDARG00000030905Danio rerio
 CITED2ENSGALG00000013818Gallus gallus
 Cited2ENSMUSG00000039910Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CITED1 / Q99966 / Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1ENSG0000012593121
CITED4 / Q96RK1 / Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4ENSG0000017986219


Protein motifs (from Interpro)
Interpro ID Name
 IPR007576  CITED


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0001568 blood vessel development IEA
 biological_processGO:0001570 vasculogenesis IEA
 biological_processGO:0001666 response to hypoxia IMP
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0001829 trophectodermal cell differentiation IEA
 biological_processGO:0001841 neural tube formation IEA
 biological_processGO:0001843 neural tube closure IEA
 biological_processGO:0001889 liver development ISS
 biological_processGO:0001892 embryonic placenta development IEA
 biological_processGO:0001944 vasculature development IEA
 biological_processGO:0001947 heart looping IEA
 biological_processGO:0002089 lens morphogenesis in camera-type eye IEA
 biological_processGO:0002244 hematopoietic progenitor cell differentiation IEA
 biological_processGO:0002521 leukocyte differentiation IEA
 biological_processGO:0003151 outflow tract morphogenesis ISS
 biological_processGO:0003156 regulation of animal organ formation ISS
 biological_processGO:0003197 endocardial cushion development IEA
 biological_processGO:0003281 ventricular septum development IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007179 transforming growth factor beta receptor signaling pathway IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007368 determination of left/right symmetry ISS
 biological_processGO:0007417 central nervous system development IEA
 biological_processGO:0007422 peripheral nervous system development IEA
 biological_processGO:0007507 heart development ISS
 biological_processGO:0007530 sex determination IBA
 biological_processGO:0007569 cell aging IEA
 biological_processGO:0008283 cell proliferation IDA
 biological_processGO:0008584 male gonad development IEA
 biological_processGO:0009612 response to mechanical stimulus IEA
 biological_processGO:0010628 positive regulation of gene expression IDA
 biological_processGO:0010629 negative regulation of gene expression IDA
 biological_processGO:0021602 cranial nerve morphogenesis IEA
 biological_processGO:0022409 positive regulation of cell-cell adhesion ISS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030325 adrenal gland development IEA
 biological_processGO:0030336 negative regulation of cell migration IMP
 biological_processGO:0030511 positive regulation of transforming growth factor beta receptor signaling pathway ISS
 biological_processGO:0030851 granulocyte differentiation IEA
 biological_processGO:0034405 response to fluid shear stress IMP
 biological_processGO:0035360 positive regulation of peroxisome proliferator activated receptor signaling pathway IDA
 biological_processGO:0035802 adrenal cortex formation ISS
 biological_processGO:0035914 skeletal muscle cell differentiation IEA
 biological_processGO:0043066 negative regulation of apoptotic process ISS
 biological_processGO:0043627 response to estrogen IDA
 biological_processGO:0045787 positive regulation of cell cycle ISS
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IMP
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II TAS
 biological_processGO:0046697 decidualization IEA
 biological_processGO:0048536 spleen development ISS
 biological_processGO:0048538 thymus development IEA
 biological_processGO:0048596 embryonic camera-type eye morphogenesis IEA
 biological_processGO:0048821 erythrocyte development IEA
 biological_processGO:0060044 negative regulation of cardiac muscle cell proliferation IEA
 biological_processGO:0060136 embryonic process involved in female pregnancy IEA
 biological_processGO:0060349 bone morphogenesis IEA
 biological_processGO:0060411 cardiac septum morphogenesis IEA
 biological_processGO:0060412 ventricular septum morphogenesis ISS
 biological_processGO:0060971 embryonic heart tube left/right pattern formation ISS
 biological_processGO:0060972 left/right pattern formation IBA
 biological_processGO:0061156 pulmonary artery morphogenesis IEA
 biological_processGO:0061308 cardiac neural crest cell development involved in heart development IEA
 biological_processGO:0061371 determination of heart left/right asymmetry IEA
 biological_processGO:0061428 negative regulation of transcription from RNA polymerase II promoter in response to hypoxia IDA
 biological_processGO:0070986 left/right axis specification ISS
 biological_processGO:0071363 cellular response to growth factor stimulus IEA
 biological_processGO:1900164 nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry ISS
 biological_processGO:2000020 positive regulation of male gonad development ISS
 cellular_componentGO:0000790 nuclear chromatin ISS
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0032991 protein-containing complex IMP
 molecular_functionGO:0001102 RNA polymerase II activating transcription factor binding IEA
 molecular_functionGO:0003682 chromatin binding ISS
 molecular_functionGO:0003700 DNA-binding transcription factor activity ISS
 molecular_functionGO:0003713 transcription coactivator activity IDA
 molecular_functionGO:0003714 transcription corepressor activity IMP
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019904 protein domain specific binding IPI
 molecular_functionGO:0035035 histone acetyltransferase binding IDA
 molecular_functionGO:0046332 SMAD binding IEA
 molecular_functionGO:0050693 LBD domain binding IPI


Pathways (from Reactome)
Pathway description
Regulation of gene expression by Hypoxia-inducible Factor
TFAP2 (AP-2) family regulates transcription of other transcription factors
Activation of the TFAP2 (AP-2) family of transcription factors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
Show

 HP:0000233 Thin vermillion border 
Show

 HP:0000268 Dolichocephaly 
Show

 HP:0000337 Broad forehead "Abnormally large side-to-side distance of the forehead." [HPO:curators]
Show

 HP:0000520 Proptosis 
Show

 HP:0001156 Brachydactyly 
Show

 HP:0001511 Intrauterine growth retardation 
Show

 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
Show

 HP:0001636 Tetralogy of Fallot "A congenital cardiac malformation comprising pulmonary stenosis, overriding aorta, ventricular septum defect, and right ventricular hypertrophy. The diagnosis of TOF is made if at least three of the four above mentioned features are present." [HPO:curators]
Show

 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
Show

 HP:0004467 Preauricular sinus "The preauricular sinus is a benign congenital lesion of the preauricular soft tissue consisting of a blind-ending narrow tube or pit. It is also known as preauricular pit, preauricular fistula, preauricular tract and preauricular cyst. It can be asymptomatic or present as an infected and discharging sinus. It presents as a small pit adjacent to the external ear usually located at the anterior margin of the ascending limb of the helix." [HPO:curators]
Show

 HP:0005105 Abnormal nasal morphology 
Show

 HP:0009891 Hypoplasia of the supraorbital ridges "Underdevelopment of the supraorbital ridges." [HPO:curators]
Show

 HP:0011682 Perimembranous ventricular septal defect "A ventricular septal defect that is confluent with and involves the membranous septum and is bordered by an atrioventricular valve, not including the type 3 VSDs." [DDD:dbrown, pmid:10798413]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000008196 Q92481 / TFAP2B / transcription factor AP-2 beta  / complex / reaction
 ENSG00000087510 Q92754 / TFAP2C / transcription factor AP-2 gamma  / reaction / complex
 ENSG00000137203 P05549 / TFAP2A / transcription factor AP-2 alpha  / reaction / complex
 ENSG00000005339 CREBBP / Q92793 / CREB binding protein  / complex / reaction
 ENSG00000100393 EP300 / Q09472 / E1A binding protein p300  / reaction / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr