ENSDARG00000030975


Danio rerio

Features
Gene ID: ENSDARG00000030975
  
Biological name :ccdc80l1
  
Synonyms : ccdc80l1 / coiled-coil domain containing 80 like 1
  
Possible biological names infered from orthology : CCDC80 / coiled-coil domain containing 80 / Coiled-coil domain-containing protein 80 / Q76M96 / Q8R2G6
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 16406723
Gene end: 16423323
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000040034
NCBI entrez gene - 569128     See in Manteia.
swissprot - E7FD69
ZFIN ID - ZDB-GENE-120328-4
Ensembl - ENSDARG00000030975
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCDC80ENSGALG00000015193Gallus gallus
 CCDC80ENSG00000091986Homo sapiens
 Ccdc80ENSMUSG00000022665Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ccdc80 / Q90X49 / coiled-coil domain containing 80 / Q76M96* / Q8R2G6* / Coiled-coil domain-containing protein 80 *ENSDARG0000000000247
ccdc80l2 / coiled-coil domain containing 80 like 2ENSDARG0000004469517
srpx / sushi-repeat containing protein, X-linked / P78539* / Q9R0M3* / Sushi-repeat-containing protein SRPX *ENSDARG000000103189
srpx2 / sushi-repeat containing protein, X-linked 2 / O60687* / Q8R054* / Sushi repeat-containing protein SRPX2 *ENSDARG000000345599


Protein motifs (from Interpro)
Interpro ID Name
 IPR025232  Domain of unknown function DUF4174


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007411 axon guidance IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism circling , abnormal
whole organism movement behavioral quality , abnormal
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 ZFA:0009052 motor neuron motor neuron axon disoriented , abnormal
motor neuron axon increased branchiness , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr