ENSG00000091986


Homo sapiens

Features
Gene ID: ENSG00000091986
  
Biological name :CCDC80
  
Synonyms : CCDC80 / coiled-coil domain containing 80 / Q76M96
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q13.2
Gene start: 112596794
Gene end: 112649530
  
Corresponding Affymetrix probe sets: 225241_at (Human Genome U133 Plus 2.0 Array)   225242_s_at (Human Genome U133 Plus 2.0 Array)   227061_at (Human Genome U133 Plus 2.0 Array)   243864_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000411814
Ensembl peptide - ENSP00000420123
Ensembl peptide - ENSP00000418188
Ensembl peptide - ENSP00000206423
NCBI entrez gene - 151887     See in Manteia.
OMIM - 608298
RefSeq - NM_199511
RefSeq - NM_199512
RefSeq Peptide - NP_955805
RefSeq Peptide - NP_955806
swissprot - Q76M96
swissprot - H7C5K4
swissprot - C9J8I6
Ensembl - ENSG00000091986
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccdc80ENSDARG00000000002Danio rerio
 ccdc80l1ENSDARG00000030975Danio rerio
 CCDC80ENSGALG00000015193Gallus gallus
 Ccdc80ENSMUSG00000022665Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SRPX2 / O60687 / sushi repeat containing protein, X-linked 2ENSG000001023599
SRPX / P78539 / sushi repeat containing protein, X-linkedENSG000001019559


Protein motifs (from Interpro)
Interpro ID Name
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR025232  Domain of unknown function DUF4174


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010811 positive regulation of cell-substrate adhesion IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0005614 interstitial matrix IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0001968 fibronectin binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005539 glycosaminoglycan binding IEA
 molecular_functionGO:0008201 heparin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr