ENSDARG00000031426


Danio rerio

Features
Gene ID: ENSDARG00000031426
  
Biological name :csrnp1a
  
Synonyms : csrnp1a / cysteine-serine-rich nuclear protein 1a
  
Possible biological names infered from orthology : CSRNP1 / cysteine and serine rich nuclear protein 1 / Mus musculus cysteine-serine-rich nuclear protein 1 (Csrnp1), transcript variant 3, mRNA. / P59054 / Q96S65
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 23790748
Gene end: 23805139
  
Corresponding Affymetrix probe sets: Dr.16251.1.A1_at (Zebrafish Array)   XM_683666_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000041876
NCBI entrez gene - 560270     See in Manteia.
RefSeq - XM_683666
swissprot - B0S776
ZFIN ID - ZDB-GENE-070912-475
Ensembl - ENSDARG00000031426
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSRNP1ENSGALG00000027905Gallus gallus
 CSRNP1ENSG00000144655Homo sapiens
 Csrnp1ENSMUSG00000032515Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
csrnp1b / cysteine-serine-rich nuclear protein 1b / Q96S65* / P59054* / CSRNP1* / cysteine and serine rich nuclear protein 1* / Mus musculus cysteine-serine-rich nuclear protein 1 (Csrnp1),...ENSDARG0000003842946
csrnp2 / cysteine-serine-rich nuclear protein 2 / Q8BGQ2* / Q9H175* / cysteine and serine rich nuclear protein 2*ENSDARG0000007597230
CSRNP3 / cysteine and serine rich nuclear protein 3 / Q8WYN3*ENSDARG0000007974129


Protein motifs (from Interpro)
Interpro ID Name
 IPR023260  Cysteine/serine-rich nuclear protein family
 IPR031972  Cysteine/serine-rich nuclear protein, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060215 primitive hemopoiesis IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000033 intermediate cell mass of mesoderm intermediate cell mass of mesoderm blood cell decreased amount , abnormal
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 ZFA:0009141 macrophage macrophage decreased amount , abnormal
Show

 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte decreased amount , abnormal
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 ZFA:0009327 neutrophil neutrophil decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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