ENSDARG00000031795


Danio rerio

Features
Gene ID: ENSDARG00000031795
  
Biological name :abcf1
  
Synonyms : abcf1 / ATP-binding cassette, sub-family F (GCN20), member 1
  
Possible biological names infered from orthology : ATP binding cassette subfamily F member 1 / Q6P542 / Q8NE71
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 30428913
Gene end: 30447743
  
Corresponding Affymetrix probe sets: Dr.26504.1.S1_at (Zebrafish Array)   Dr.4288.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000048976
Ensembl peptide - ENSDARP00000155687
Ensembl peptide - ENSDARP00000068195
NCBI entrez gene - 406467     See in Manteia.
RefSeq - NM_213186
RefSeq - XM_021468041
RefSeq Peptide - NP_998351
swissprot - A3KPX2
swissprot - A3KPX1
ZFIN ID - ZDB-GENE-050517-31
Ensembl - ENSDARG00000031795
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCF1ENSG00000204574Homo sapiens
 Abcf1ENSMUSG00000038762Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCF3 / ATP binding cassette subfamily F member 3 / Q9NUQ8*ENSDARG0000008970512


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA


Pathways (from Reactome)
Pathway description
ABC-family proteins mediated transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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