ENSDARG00000032221


Danio rerio

Features
Gene ID: ENSDARG00000032221
  
Biological name :phactr4b
  
Synonyms : phactr4b / phosphatase and actin regulator 4b / Q6PEI3
  
Possible biological names infered from orthology : PHACTR4 / phosphatase and actin regulator 4 / Q501J7 / Q8IZ21
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 34199297
Gene end: 34285106
  
Corresponding Affymetrix probe sets: Dr.11332.1.A1_at (Zebrafish Array)   NM_200670_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000044234
Ensembl peptide - ENSDARP00000121135
Ensembl peptide - ENSDARP00000123027
NCBI entrez gene - 393643     See in Manteia.
RefSeq - NM_200670
RefSeq Peptide - NP_956964
swissprot - F1QH18
swissprot - E9QED4
swissprot - Q6PEI3
ZFIN ID - ZDB-GENE-040426-1131
Ensembl - ENSDARG00000032221
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHACTR4ENSGALG00000042485Gallus gallus
 Q8IZ21ENSG00000204138Homo sapiens
 Q501J7ENSMUSG00000066043Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
phactr4a / phosphatase and actin regulator 4a / Q8IZ21* / Q501J7* / PHACTR4* / phosphatase and actin regulator 4*ENSDARG0000001555249
phactr1 / phosphatase and actin regulator 1 / Q9C0D0*ENSDARG0000002391624
phactr3b / phosphatase and actin regulator 3b / Q96KR7* / Q8BYK5* / PHACTR3* / phosphatase and actin regulator 3*ENSDARG0000001930421
phactr3a / phosphatase and actin regulator 3a / Q96KR7* / Q8BYK5* / PHACTR3* / phosphatase and actin regulator 3*ENSDARG0000005824321
phactr2 / phosphatase and actin regulator 2 / O75167*ENSDARG0000002717219
CABZ01085887.1 / Q9C0D0* / PHACTR1* / phosphatase and actin regulator 1*ENSDARG0000011020610


Protein motifs (from Interpro)
Interpro ID Name
 IPR004018  RPEL repeat
 IPR029984  Phosphatase and actin regulator 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001755 neural crest cell migration ISS
 biological_processGO:0001843 neural tube closure ISS
 biological_processGO:0007266 Rho protein signal transduction ISS
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0030036 actin cytoskeleton organization ISS
 biological_processGO:0043085 positive regulation of catalytic activity ISS
 biological_processGO:0043666 regulation of phosphoprotein phosphatase activity IEA
 biological_processGO:0048484 enteric nervous system development ISS
 biological_processGO:0051726 regulation of cell cycle ISS
 biological_processGO:0061386 closure of optic fissure ISS
 biological_processGO:2001045 negative regulation of integrin-mediated signaling pathway ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0030027 lamellipodium ISS
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0003779 actin binding ISS
 molecular_functionGO:0008157 protein phosphatase 1 binding ISS
 molecular_functionGO:0072542 protein phosphatase activator activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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