ENSDARG00000033361


Danio rerio

Features
Gene ID: ENSDARG00000033361
  
Biological name :asl
  
Synonyms : argininosuccinate lyase / asl
  
Possible biological names infered from orthology : AC068533.4 / P04424 / Q91YI0
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 31253048
Gene end: 31277336
  
Corresponding Affymetrix probe sets: Dr.11501.1.S1_at (Zebrafish Array)   NM_200451_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000119408
Ensembl peptide - ENSDARP00000143521
Ensembl peptide - ENSDARP00000040189
NCBI entrez gene - 393423     See in Manteia.
RefSeq - NM_200451
RefSeq Peptide - NP_956745
swissprot - E9QEZ3
swissprot - F1RA91
ZFIN ID - ZDB-GENE-040426-1152
Ensembl - ENSDARG00000033361
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ASL1ENSGALG00000002558Gallus gallus
 ASL2ENSGALG00000002576Gallus gallus
 AC068533.4ENSG00000249319Homo sapiens
 ASLENSG00000126522Homo sapiens
 AslENSMUSG00000025533Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000362  Fumarate lyase family
 IPR008948  L-Aspartase-like
 IPR009049  Argininosuccinate lyase
 IPR020557  Fumarate lyase, conserved site
 IPR022761  Fumarate lyase, N-terminal
 IPR024083  Fumarase/histidase, N-terminal
 IPR029419  Argininosuccinate lyase, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042450 arginine biosynthetic process via ornithine IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004056 argininosuccinate lyase activity IBA


Pathways (from Reactome)
Pathway description
Urea cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000033361 asl / argininosuccinate lyase / P04424* / Q91YI0* / AC068533.4*  / complex






 

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contact: otassy@igbmc.fr