ENSDARG00000033440


Danio rerio

Features
Gene ID: ENSDARG00000033440
  
Biological name :metap1
  
Synonyms : metap1 / methionyl aminopeptidase 1
  
Possible biological names infered from orthology : Methionine aminopeptidase 1 / P53582 / Q8BP48
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 12606821
Gene end: 12633160
  
Corresponding Affymetrix probe sets: Dr.3335.1.A1_at (Zebrafish Array)   NM_001025165_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000113818
Ensembl peptide - ENSDARP00000121116
NCBI entrez gene - 503783     See in Manteia.
RefSeq - NM_001025165
RefSeq Peptide - NP_001020336
swissprot - F1R5G0
swissprot - B8JIB1
ZFIN ID - ZDB-GENE-050626-124
Ensembl - ENSDARG00000033440
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 METAP1ENSGALG00000012239Gallus gallus
 METAP1ENSG00000164024Homo sapiens
 Metap1ENSMUSG00000005813Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
metap1d / methionyl aminopeptidase type 1D (mitochondrial) / Q6UB28* / Q9CPW9* / Methionine aminopeptidase 1D, mitochondrial *ENSDARG0000001971534


Protein motifs (from Interpro)
Interpro ID Name
 IPR000994  Peptidase M24
 IPR001714  Peptidase M24, methionine aminopeptidase
 IPR002467  Peptidase M24A, methionine aminopeptidase, subfamily 1
 IPR031615  MYND-like zinc finger, mRNA-binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0070084 protein initiator methionine removal IEA
 molecular_functionGO:0004177 aminopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008235 metalloexopeptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070006 metalloaminopeptidase activity IEA


Pathways (from Reactome)
Pathway description
Inactivation, recovery and regulation of the phototransduction cascade


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000044199 gnat1 / guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 / P20612* / P11488* / G protein subunit alpha transducin 1* / guanine nucleotide binding pro...  / reaction






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr