ENSDARG00000034013


Danio rerio

Features
Gene ID: ENSDARG00000034013
  
Biological name :rgmd
  
Synonyms : rgmd / RGM domain family, member D
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 19640309
Gene end: 19646421
  
Corresponding Affymetrix probe sets: Dr.4550.1.A1_at (Zebrafish Array)   NM_199573_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000061724
Ensembl peptide - ENSDARP00000123317
NCBI entrez gene - 321842     See in Manteia.
RefSeq - NM_199573
RefSeq - XM_021469302
RefSeq Peptide - NP_955867
swissprot - Q1LWZ7
swissprot - F1QSW2
ZFIN ID - ZDB-GENE-030131-561
Ensembl - ENSDARG00000034013
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rgmb / repulsive guidance molecule family member b / Q6NW40* / repulsive guidance molecule BMP co-receptor b*ENSDARG0000007932344
rgma / repulsive guidance molecule family member a / Q6PCX7* / Q96B86* / Repulsive guidance molecule A * / repulsive guidance molecule BMP co-receptor a*ENSDARG0000001224840
hfe2 / hemochromatosis type 2 / Q6ZVN8* / Q7TQ32* / Hemojuvelin * / hemochromatosis type 2 (juvenile)*ENSDARG0000003049433


Protein motifs (from Interpro)
Interpro ID Name
 IPR009496  Repulsive guidance molecule, C-terminal
 IPR010536  Repulsive guidance molecule, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000123 liver liver decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr