ENSDARG00000079323


Danio rerio

Features
Gene ID: ENSDARG00000079323
  
Biological name :rgmb
  
Synonyms : repulsive guidance molecule family member b / rgmb
  
Possible biological names infered from orthology : Q6NW40 / Q7TQ33 / repulsive guidance molecule BMP co-receptor b / RGM domain family member B
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 52256885
Gene end: 52277643
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000017606
NCBI entrez gene - 414273     See in Manteia.
RefSeq - NM_001001727
RefSeq Peptide - NP_001001727
swissprot - Q6IYD1
ZFIN ID - ZDB-GENE-040527-2
Ensembl - ENSDARG00000079323
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RGMBENSGALG00000015284Gallus gallus
 RGMBENSG00000174136Homo sapiens
 RgmbENSMUSG00000048027Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rgmd / RGM domain family, member DENSDARG0000003401346
rgma / repulsive guidance molecule family member a / Q6PCX7* / Q96B86* / Repulsive guidance molecule A * / repulsive guidance molecule BMP co-receptor a*ENSDARG0000001224845
hfe2 / hemochromatosis type 2 / Q6ZVN8* / Q7TQ32* / Hemojuvelin * / hemochromatosis type 2 (juvenile)*ENSDARG0000003049434


Protein motifs (from Interpro)
Interpro ID Name
 IPR009496  Repulsive guidance molecule, C-terminal
 IPR010536  Repulsive guidance molecule, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0030509 BMP signaling pathway IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0046658 anchored component of plasma membrane ISS
 molecular_functionGO:0015026 coreceptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000123 liver liver decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr