ENSDARG00000034768


Danio rerio

Features
Gene ID: ENSDARG00000034768
  
Biological name :phf3
  
Synonyms : PHD finger protein 3 / phf3
  
Possible biological names infered from orthology : Q92576
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 37653851
Gene end: 37673576
  
Corresponding Affymetrix probe sets: Dr.167.1.A1_at (Zebrafish Array)   XM_681308_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000091125
Ensembl peptide - ENSDARP00000148563
Ensembl peptide - ENSDARP00000121794
Ensembl peptide - ENSDARP00000108846
NCBI entrez gene - 553518     See in Manteia.
RefSeq - XM_021480885
RefSeq - XM_021480886
RefSeq - XM_681308
RefSeq - XM_005157030
RefSeq - XM_017358845
swissprot - B8A485
swissprot - B8A484
swissprot - B8A483
ZFIN ID - ZDB-GENE-090313-207
Ensembl - ENSDARG00000034768
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHF3ENSGALG00000016267Gallus gallus
 PHF3ENSG00000118482Homo sapiens
 Phf3ENSMUSG00000048874Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dido1 / death inducer-obliterator 1 / Q9BTC0*ENSDARG0000005794018
si:ch73-181d5.4 / DIDO1* / Q8C9B9* / Q9BTC0* / death inducer-obliterator 1*ENSDARG0000005790713


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR003618  Transcription elongation factor S-II, central domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR012921  Spen paralogue and orthologue SPOC, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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