ENSDARG00000057907


Danio rerio

Features
Gene ID: ENSDARG00000057907
  
Biological name :si:ch73-181d5.4
  
Synonyms : si:ch73-181d5.4
  
Possible biological names infered from orthology : death inducer-obliterator 1 / DIDO1 / Q8C9B9 / Q9BTC0
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 457569
Gene end: 478201
  
Corresponding Affymetrix probe sets: Dr.16604.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121822
NCBI entrez gene - 100538306     See in Manteia.
RefSeq - XM_003201155
swissprot - E7FB55
ZFIN ID - ZDB-GENE-100922-118
Ensembl - ENSDARG00000057907
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000039201Gallus gallus
 ENSGALG00000005652Gallus gallus
 ENSGALG00000044211Gallus gallus
 DIDO1ENSG00000101191Homo sapiens
 Dido1ENSMUSG00000038914Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dido1 / death inducer-obliterator 1 / Q9BTC0*ENSDARG0000005794023
phf3 / PHD finger protein 3 / Q92576*ENSDARG0000003476810


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR003618  Transcription elongation factor S-II, central domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR012921  Spen paralogue and orthologue SPOC, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0097190 apoptotic signaling pathway IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr