ENSMUSG00000048874


Mus musculus

Features
Gene ID: ENSMUSG00000048874
  
Biological name :Phf3
  
Synonyms : PHD finger protein 3 / Phf3
  
Possible biological names infered from orthology : Q92576
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: A5
Gene start: 30802339
Gene end: 30873921
  
Corresponding Affymetrix probe sets: 10353689 (MoGene1.0st)   1420119_s_at (Mouse Genome 430 2.0 Array)   1420120_at (Mouse Genome 430 2.0 Array)   1428998_at (Mouse Genome 430 2.0 Array)   1428999_at (Mouse Genome 430 2.0 Array)   1429000_at (Mouse Genome 430 2.0 Array)   1438070_at (Mouse Genome 430 2.0 Array)   1442173_at (Mouse Genome 430 2.0 Array)   1452441_at (Mouse Genome 430 2.0 Array)   1456115_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000085650
Ensembl peptide - ENSMUSP00000140935
Ensembl peptide - ENSMUSP00000140746
Ensembl peptide - ENSMUSP00000139662
Ensembl peptide - ENSMUSP00000139610
Ensembl peptide - ENSMUSP00000139454
NCBI entrez gene - 213109     See in Manteia.
MGI - MGI:2446126
RefSeq - XM_011238471
RefSeq - XM_006495837
RefSeq - XM_006495838
RefSeq - XM_006495839
RefSeq - XM_006495840
RefSeq - XM_006495841
RefSeq - XM_011238470
RefSeq - NM_001081080
RefSeq - XM_006495836
RefSeq Peptide - NP_001074549
swissprot - A0A087WRR9
swissprot - A0A087WP76
swissprot - A0A087WNQ9
swissprot - A0A087WS81
swissprot - B2RQG2
Ensembl - ENSMUSG00000048874
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 phf3ENSDARG00000034768Danio rerio
 PHF3ENSGALG00000016267Gallus gallus
 PHF3ENSG00000118482Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Dido1 / Q8C9B9 / Death-inducer obliterator 1 / Q9BTC0*ENSMUSG0000003891422
Spocd1 / Q6ZMY3* / SPOC domain containing 1*ENSMUSG000000287849


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR003618  Transcription elongation factor S-II, central domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR012921  Spen paralogue and orthologue SPOC, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR036575  Transcription elongation factor S-II, central domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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