ENSDARG00000035023


Danio rerio

Features
Gene ID: ENSDARG00000035023
  
Biological name :khdc4
  
Synonyms : khdc4 / KH domain containing 4, pre-mRNA splicing factor
  
Possible biological names infered from orthology : 2810403A07Rik / Protein BLOM7 / Q3TCX3 / Q7Z7F0
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 54785264
Gene end: 54800202
  
Corresponding Affymetrix probe sets: Dr.1618.1.S1_at (Zebrafish Array)   NM_212593_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000059559
Ensembl peptide - ENSDARP00000134042
NCBI entrez gene - 321686     See in Manteia.
RefSeq - NM_212593
RefSeq - XM_005169774
RefSeq - XM_009292747
RefSeq - XM_005169775
RefSeq - XM_009292749
RefSeq - XM_009292748
RefSeq Peptide - NP_997758
swissprot - F1QQM1
swissprot - A0A0R4IGB2
ZFIN ID - ZDB-GENE-030131-405
Ensembl - ENSDARG00000035023
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BLOM7ENSGALG00000014652Gallus gallus
 KHDC4ENSG00000132680Homo sapiens
 Q3TCX3ENSMUSG00000028060Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004088  K Homology domain, type 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr