ENSG00000132680


Homo sapiens

Features
Gene ID: ENSG00000132680
  
Biological name :KHDC4
  
Synonyms : KHDC4 / KH domain containing 4, pre-mRNA splicing factor / Q7Z7F0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q22
Gene start: 155913043
Gene end: 155934400
  
Corresponding Affymetrix probe sets: 202220_at (Human Genome U133 Plus 2.0 Array)   230028_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000357304
Ensembl peptide - ENSP00000357302
Ensembl peptide - ENSP00000357303
NCBI entrez gene - 22889     See in Manteia.
RefSeq - NM_014949
RefSeq Peptide - NP_055764
swissprot - Q7Z7F0
Ensembl - ENSG00000132680
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 khdc4ENSDARG00000035023Danio rerio
 BLOM7ENSGALG00000014652Gallus gallus
 Q3TCX3ENSMUSG00000028060Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006376 mRNA splice site selection IDA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005681 spliceosomal complex IDA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr