ENSMUSG00000028060


Mus musculus

Features
Gene ID: ENSMUSG00000028060
  
Biological name :2810403A07Rik
  
Synonyms : 2810403A07Rik / Protein BLOM7 / Q3TCX3
  
Possible biological names infered from orthology : KHDC4 / KH domain containing 4, pre-mRNA splicing factor / Q7Z7F0
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: F1
Gene start: 88685803
Gene end: 88712924
  
Corresponding Affymetrix probe sets: 10493292 (MoGene1.0st)   1426365_at (Mouse Genome 430 2.0 Array)   1430955_at (Mouse Genome 430 2.0 Array)   1440854_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000142760
Ensembl peptide - ENSMUSP00000142773
Ensembl peptide - ENSMUSP00000029696
Ensembl peptide - ENSMUSP00000142353
NCBI entrez gene - 74200     See in Manteia.
MGI - MGI:1921450
RefSeq - NM_028814
RefSeq - XM_017319752
RefSeq Peptide - NP_083090
swissprot - A0A0G2JEG2
swissprot - Q3TCX3
Ensembl - ENSMUSG00000028060
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 khdc4ENSDARG00000035023Danio rerio
 BLOM7ENSGALG00000014652Gallus gallus
 KHDC4ENSG00000132680Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006376 mRNA splice site selection ISO
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005681 spliceosomal complex ISO
 cellular_componentGO:0005737 cytoplasm ISS
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr