ENSDARG00000035325


Danio rerio

Features
Gene ID: ENSDARG00000035325
  
Biological name :srsf7a
  
Synonyms : serine/arginine-rich splicing factor 7a / srsf7a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 36895545
Gene end: 36899144
  
Corresponding Affymetrix probe sets: Dr.701.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000115725
Ensembl peptide - ENSDARP00000126430
Ensembl peptide - ENSDARP00000126378
Ensembl peptide - ENSDARP00000122833
Ensembl peptide - ENSDARP00000121453
Ensembl peptide - ENSDARP00000120084
Ensembl peptide - ENSDARP00000117198
Ensembl peptide - ENSDARP00000051184
Ensembl peptide - ENSDARP00000113076
Ensembl peptide - ENSDARP00000113600
NCBI entrez gene - 402972     See in Manteia.
RefSeq - NM_205673
RefSeq - XM_005165288
RefSeq Peptide - NP_991236
swissprot - A2BHA8
swissprot - A2BHA7
swissprot - A2BHA6
swissprot - K7DY51
swissprot - K7DYA2
swissprot - Q6P0K2
swissprot - A2BHB2
swissprot - A2BHB0
swissprot - A2BHA9
ZFIN ID - ZDB-GENE-040426-1798
Ensembl - ENSDARG00000035325
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
srsf7b / serine/arginine-rich splicing factor 7b / SRSF7* / Q16629* / serine and arginine rich splicing factor 7*ENSDARG0000010105740
srsf3b / serine/arginine-rich splicing factor 3b / SRSF3* / P84104* / P84103* / Gm12355* / serine/arginine-rich splicing factor 3* / serine and arginine rich splicing factor 3*ENSDARG0000005936035
srsf3a / serine/arginine-rich splicing factor 3a / SRSF3* / P84104* / P84103* / Gm12355* / serine/arginine-rich splicing factor 3* / serine and arginine rich splicing factor 3*ENSDARG0000002539734
srsf3a / serine/arginine-rich splicing factor 3a / SRSF3* / P84104* / P84103* / Gm12355* / serine/arginine-rich splicing factor 3* / serine and arginine rich splicing factor 3*ENSDARG0000010081534


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR001878  Zinc finger, CCHC-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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