ENSDARG00000035505


Danio rerio

Features
Gene ID: ENSDARG00000035505
  
Biological name :nelfb
  
Synonyms : negative elongation factor complex member B / nelfb
  
Possible biological names infered from orthology : negative elongation factor B isoform 1 / Q8WX92
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 29548441
Gene end: 29559927
  
Corresponding Affymetrix probe sets: Dr.7707.1.S1_at (Zebrafish Array)   NM_200168_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000051470
Ensembl peptide - ENSDARP00000113671
Ensembl peptide - ENSDARP00000141564
NCBI entrez gene - 393137     See in Manteia.
RefSeq - NM_200168
RefSeq Peptide - NP_956462
swissprot - F1RDH4
swissprot - A0A0R4IWG6
swissprot - Q6ZM70
ZFIN ID - ZDB-GENE-040426-765
Ensembl - ENSDARG00000035505
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NELFBENSGALG00000008532Gallus gallus
 NELFBENSG00000188986Homo sapiens
 NelfbENSMUSG00000013465Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR010405  Cofactor of BRCA1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:1901534 positive regulation of hematopoietic progenitor cell differentiation IMP
 biological_processGO:1902038 positive regulation of hematopoietic stem cell differentiation IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Formation of RNA Pol II elongation complex
Formation of the Early Elongation Complex
RNA Polymerase II Pre-transcription Events
TP53 Regulates Transcription of DNA Repair Genes
RNA Polymerase II Transcription Elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009354 hematopoietic multipotent progenitor cell hematopoietic multipotent progenitor cell amount , ameliorated
hematopoietic multipotent progenitor cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr