ENSDARG00000035625


Danio rerio

Features
Gene ID: ENSDARG00000035625
  
Biological name :snrnp27
  
Synonyms : Q6DH74 / small nuclear ribonucleoprotein 27 (U4/U6.U5) / snrnp27
  
Possible biological names infered from orthology : Q8K194 / Q8WVK2 / small nuclear ribonucleoprotein U4/U6.U5 subunit 27 / U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 13767743
Gene end: 13778726
  
Corresponding Affymetrix probe sets: Dr.13288.1.A1_at (Zebrafish Array)   NM_001002703_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000051654
NCBI entrez gene - 436976     See in Manteia.
RefSeq - NM_001002703
RefSeq Peptide - NP_001002703
swissprot - Q6DH74
ZFIN ID - ZDB-GENE-040718-457
Ensembl - ENSDARG00000035625
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNRNP27ENSGALG00000013883Gallus gallus
 Q8WVK2ENSG00000124380Homo sapiens
 Q8K194ENSMUSG00000001158Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013957  U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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