ENSG00000124380


Homo sapiens

Features
Gene ID: ENSG00000124380
  
Biological name :SNRNP27
  
Synonyms : Q8WVK2 / small nuclear ribonucleoprotein U4/U6.U5 subunit 27 / SNRNP27
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: p13.3
Gene start: 69893560
Gene end: 69905575
  
Corresponding Affymetrix probe sets: 212438_at (Human Genome U133 Plus 2.0 Array)   212440_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000386608
Ensembl peptide - ENSP00000430449
Ensembl peptide - ENSP00000395144
Ensembl peptide - ENSP00000244227
NCBI entrez gene - 11017     See in Manteia.
RefSeq - NM_006857
RefSeq Peptide - NP_006848
swissprot - B8ZZ98
swissprot - A8K513
swissprot - H0YBW5
swissprot - Q8WVK2
Ensembl - ENSG00000124380
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6DH74ENSDARG00000035625Danio rerio
 SNRNP27ENSGALG00000013883Gallus gallus
 Q8K194ENSMUSG00000001158Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013957  U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 molecular_functionGO:0003676 nucleic acid binding NAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr