ENSDARG00000035871


Danio rerio

Features
Gene ID: ENSDARG00000035871
  
Biological name :rpl30
  
Synonyms : ribosomal protein L30 / rpl30
  
Possible biological names infered from orthology : P62888 / P62889
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 32855139
Gene end: 32860780
  
Corresponding Affymetrix probe sets: Dr.645.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000052081
Ensembl peptide - ENSDARP00000112856
NCBI entrez gene - 336713     See in Manteia.
swissprot - Q1L8Q7
swissprot - Q7ZUG6
ZFIN ID - ZDB-GENE-030131-8657
Ensembl - ENSDARG00000035871
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPL30ENSGALG00000029897Gallus gallus
 RPL30ENSG00000156482Homo sapiens
 Rpl30ENSMUSG00000058600Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000231  Ribosomal protein L30e
 IPR004038  Ribosomal protein L7Ae/L30e/S12e/Gadd45
 IPR022991  Ribosomal protein L30e, conserved site
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
SRP-dependent cotranslational protein targeting to membrane
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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