ENSGALG00000029897


Gallus gallus

Features
Gene ID: ENSGALG00000029897
  
Biological name :RPL30
  
Synonyms : 60S ribosomal protein L30 / P67883 / RPL30
  
Possible biological names infered from orthology : P62888 / P62889 / ribosomal protein L30
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 128050861
Gene end: 128055217
  
Corresponding Affymetrix probe sets: Gga.9375.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054554
Ensembl peptide - ENSGALP00000060645
Ensembl peptide - ENSGALP00000046438
NCBI entrez gene - 425416     See in Manteia.
RefSeq - NM_001007967
RefSeq - XM_015282954
RefSeq Peptide - NP_001007968
swissprot - A0A1D5PNW0
swissprot - P67883
Ensembl - ENSGALG00000029897
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl30ENSDARG00000035871Danio rerio
 RPL30ENSG00000156482Homo sapiens
 Rpl30ENSMUSG00000058600Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000231  Ribosomal protein L30e
 IPR004038  Ribosomal protein L7Ae/L30e/S12e/Gadd45
 IPR022991  Ribosomal protein L30e, conserved site
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006412 translation IEA
 biological_processGO:0031640 killing of cells of other organism IEA
 biological_processGO:0050829 defense response to Gram-negative bacterium IEA
 biological_processGO:0061844 antimicrobial humoral immune response mediated by antimicrobial peptide IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0042788 polysomal ribosome IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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