ENSDARG00000035879


Danio rerio

Features
Gene ID: ENSDARG00000035879
  
Biological name :fuca1.2
  
Synonyms : alpha-L-fucosidase 1, tandem duplicate 2 / fuca1.2
  
Possible biological names infered from orthology : alpha-L-fucosidase 1 / FUCA1 / P04066 / Q99LJ1 / Tissue alpha-L-fucosidase
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 32488572
Gene end: 32493866
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000052089
NCBI entrez gene - 445165     See in Manteia.
RefSeq - NM_001003559
RefSeq Peptide - NP_001003559
swissprot - Q1LUJ4
ZFIN ID - ZDB-GENE-040801-78
Ensembl - ENSDARG00000035879
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FUCA1ENSGALG00000004112Gallus gallus
 FUCA1ENSG00000179163Homo sapiens
 Fuca1ENSMUSG00000028673Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fuca1.1 / alpha-L-fucosidase 1, tandem duplicate 1 / FUCA1* / Q99LJ1* / P04066* / alpha-L-fucosidase 1* / Tissue alpha-L-fucosidase *ENSDARG0000003589089
fuca2 / alpha-L-fucosidase 2 / Q99KR8* / Q9BTY2* / Mus musculus fucosidase, alpha-L- 2, plasma (Fuca2), transcript variant 2, mRNA.*ENSDARG0000004407355


Protein motifs (from Interpro)
Interpro ID Name
 IPR000933  Glycoside hydrolase, family 29
 IPR016286  Alpha-L-fucosidase, metazoa-type
 IPR017853  Glycoside hydrolase superfamily
 IPR018526  Glycoside hydrolase, family 29, conserved site
 IPR031919  Alpha-L-fucosidase, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006004 fucose metabolic process IEA
 molecular_functionGO:0004560 alpha-L-fucosidase activity IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Reactions specific to the complex N-glycan synthesis pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr