ENSDARG00000035890


Danio rerio

Features
Gene ID: ENSDARG00000035890
  
Biological name :fuca1.1
  
Synonyms : alpha-L-fucosidase 1, tandem duplicate 1 / fuca1.1
  
Possible biological names infered from orthology : alpha-L-fucosidase 1 / FUCA1 / P04066 / Q99LJ1 / Tissue alpha-L-fucosidase
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 32495419
Gene end: 32500373
  
Corresponding Affymetrix probe sets: Dr.1041.1.S1_at (Zebrafish Array)   NM_212740_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000052103
NCBI entrez gene - 335494     See in Manteia.
RefSeq - NM_212740
RefSeq Peptide - NP_997905
swissprot - Q6NY93
ZFIN ID - ZDB-GENE-030131-7434
Ensembl - ENSDARG00000035890
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FUCA1ENSGALG00000004112Gallus gallus
 FUCA1ENSG00000179163Homo sapiens
 Fuca1ENSMUSG00000028673Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fuca1.2 / alpha-L-fucosidase 1, tandem duplicate 2 / FUCA1* / Q99LJ1* / P04066* / alpha-L-fucosidase 1* / Tissue alpha-L-fucosidase *ENSDARG0000003587989
fuca2 / alpha-L-fucosidase 2 / Q99KR8* / Q9BTY2* / Mus musculus fucosidase, alpha-L- 2, plasma (Fuca2), transcript variant 2, mRNA.*ENSDARG0000004407355


Protein motifs (from Interpro)
Interpro ID Name
 IPR000933  Glycoside hydrolase, family 29
 IPR016286  Alpha-L-fucosidase, metazoa-type
 IPR017853  Glycoside hydrolase superfamily
 IPR018526  Glycoside hydrolase, family 29, conserved site
 IPR031919  Alpha-L-fucosidase, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006004 fucose metabolic process IEA
 molecular_functionGO:0004560 alpha-L-fucosidase activity IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Reactions specific to the complex N-glycan synthesis pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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