ENSDARG00000035978


Danio rerio

Features
Gene ID: ENSDARG00000035978
  
Biological name :ube3c
  
Synonyms : ube3c / ubiquitin protein ligase E3C
  
Possible biological names infered from orthology : Q15386 / Q80U95
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 40583939
Gene end: 40630698
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116921
NCBI entrez gene - 393445     See in Manteia.
RefSeq - NM_200473
RefSeq Peptide - NP_956767
swissprot - Q1LY19
ZFIN ID - ZDB-GENE-040426-1211
Ensembl - ENSDARG00000035978
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBE3CENSGALG00000006461Gallus gallus
 UBE3CENSG00000009335Homo sapiens
 Ube3cENSMUSG00000039000Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ube3b / ubiquitin protein ligase E3B / Q7Z3V4* / Q9ES34*ENSDARG0000006196027


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR000569  HECT domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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