ENSDARG00000061960


Danio rerio

Features
Gene ID: ENSDARG00000061960
  
Biological name :ube3b
  
Synonyms : ube3b / ubiquitin protein ligase E3B
  
Possible biological names infered from orthology : Q7Z3V4 / Q9ES34
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 19448078
Gene end: 19472121
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000083401
NCBI entrez gene - 556864     See in Manteia.
RefSeq - NM_001114682
RefSeq Peptide - NP_001108154
swissprot - A2BGM8
ZFIN ID - ZDB-GENE-060526-231
Ensembl - ENSDARG00000061960
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBE3BENSGALG00000013851Gallus gallus
 UBE3BENSG00000151148Homo sapiens
 Ube3bENSMUSG00000029577Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ube3c / ubiquitin protein ligase E3C / Q15386* / Q80U95*ENSDARG0000003597828


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR000569  HECT domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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