ENSG00000151148


Homo sapiens

Features
Gene ID: ENSG00000151148
  
Biological name :UBE3B
  
Synonyms : Q7Z3V4 / UBE3B / ubiquitin protein ligase E3B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: q24.11
Gene start: 109477402
Gene end: 109536705
  
Corresponding Affymetrix probe sets: 212403_at (Human Genome U133 Plus 2.0 Array)   212404_s_at (Human Genome U133 Plus 2.0 Array)   213822_s_at (Human Genome U133 Plus 2.0 Array)   227914_s_at (Human Genome U133 Plus 2.0 Array)   228860_at (Human Genome U133 Plus 2.0 Array)   232301_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000443565
Ensembl peptide - ENSP00000443131
Ensembl peptide - ENSP00000474360
Ensembl peptide - ENSP00000340596
Ensembl peptide - ENSP00000342614
Ensembl peptide - ENSP00000391529
Ensembl peptide - ENSP00000395802
Ensembl peptide - ENSP00000437694
Ensembl peptide - ENSP00000440585
NCBI entrez gene - 89910     See in Manteia.
OMIM - 608047
RefSeq - XM_017020196
RefSeq - NM_001270450
RefSeq - NM_001270451
RefSeq - NM_130466
RefSeq - NM_183415
RefSeq - XM_005253987
RefSeq - XM_006719681
RefSeq - XM_006719682
RefSeq - XM_011538959
RefSeq - XM_011538961
RefSeq - XM_017020195
RefSeq - NM_001270449
RefSeq Peptide - NP_904324
RefSeq Peptide - NP_569733
RefSeq Peptide - NP_001257378
RefSeq Peptide - NP_001257379
RefSeq Peptide - NP_001257380
swissprot - S4R3H8
swissprot - F5H6D6
swissprot - Q7Z3V4
swissprot - F5H5T5
swissprot - A0A024RBI2
Ensembl - ENSG00000151148
  
Related genetic diseases (OMIM): 244450 - Kaufman oculocerebrofacial syndrome, 244450
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ube3bENSDARG00000061960Danio rerio
 UBE3BENSGALG00000013851Gallus gallus
 Ube3bENSMUSG00000029577Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
UBE3C / Q15386 / ubiquitin protein ligase E3CENSG0000000933528


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR000569  HECT domain
 IPR035983  HECT, E3 ligase catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000154 Wide mouth "Abnormally wide mouth." [HPO:curators]
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 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000219 Thin upper lip 
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 HP:0000233 Thin vermillion border 
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 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000275 Narrow face 
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 HP:0000276 Long face 
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 HP:0000278 Retrognathia 
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000319 Flat philtrum 
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 HP:0000322 Short philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000384 Preauricular skin tag "A rudimentary tag of ear tissue often containing a core of cartilage and located just in front of the auricle (outer part of the ear)." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000482 Microcornea "A congenital abnormality of the `cornea` (FMA:58238) in which the cornea and the anterior segment of the eye are smaller than normal. The horizontal diameter of the cornea does not reach 10 mm even in adulthood." [HPO:probinson]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000506 Telecanthus "An abnormally increased distance between the medial canthi (angle between eyelids) of the eyelids." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000535 Sparse eyebrows 
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 HP:0000543 Pale optic disks 
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 HP:0000545 Myopia 
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 HP:0000581 Blepharophimosis "Reduced width of the palpebral fissures." [HPO:sdoelken]
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 HP:0000582 Upslanting palpebral fissures 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000670 Carious teeth 
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 HP:0000691 Microdontia 
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 HP:0000699 Diastema 
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 HP:0000954 Transverse palmar creases "The presence of a single palmar crease (instead of the two palmar creases that are typically present)." [HPO:curators]
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 HP:0000963 Thin skin 
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 HP:0001135 Chorioretinal dystrophy 
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 HP:0001139 Choroideremia 
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 HP:0001166 Arachnodactyly "Abnormally long and slender fingers ("spider fingers")." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001328 Learning disability 
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 HP:0001344 Absent speech development 
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 HP:0001508 Failure to thrive 
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 HP:0001510 Growth retardation 
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 HP:0001591 Bell-shaped chest 
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001833 Large feet 
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 HP:0001840 Metatarsus varus "Metatarsus varus (adductus) is one of the most common foot deformities, that is defined as a transverse plane deformity in Lisfranc s (tarsometatarsal) joints in which the metatarsals are deviated medially. The relationship between talus and calcaneus is normal. On inspection the toes angle abruptly towards the midline, creating a C-shaped lateral foot border with a prominent styloid process of the 5th metatarsal. The result is that the forefoot is twisted inwards relative to the heel, so that the sole faces the midline." [HPO:curators]
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 HP:0002019 Constipation 
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 HP:0002098 Respiratory distress 
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 HP:0002223 Absent eyebrows 
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 HP:0002643 Neonatal respiratory distress 
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 HP:0002705 High, narrow palate "The presence of a high and narrow palate." [HPO:curators]
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 HP:0002719 Recurrent infections 
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 HP:0002878 Early respiratory failure 
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 HP:0003146 Hypocholesterolemia 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003300 Ovoid vertebral bodies 
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 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
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 HP:0004283 Narrow hand 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005469 Occipital plagiocephaly "Occipital plagiocephaly can result from fusion or sclerosis of the lambdoid suture. If unilateral, this is accompanied by unilateral occipital flattening and bulging of the ispilateral frontal bone." [HPO:curators]
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 HP:0006511 Laryngeal stridor 
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 HP:0008070 Sparse hair 
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 HP:0008665 Hypertrophic clitoris 
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 HP:0008872 Feeding problems in infancy 
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0010547 Muscle flaccidity "A type of paralysis in which a muscle becomes soft and yields to passive stretching, which results from loss of all or practically all peripheral motor nerves that innervated the muscle. Muscle tone is reduced and the affected muscles undergo extreme atrophy within months of the loss of innervation." [HPO:curators]
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0011302 Long palm "For children from birth to 16 years of age the length of the palm is more than the 97th centile; or, the length of the palm appears relatively long compared to the finger length or the limb length." [pmid:19125433]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012745 Short palpebral fissure "Distance between the medial and lateral canthi is more than 2 SD below the mean for age (objective); or, apparently reduced length of the palpebral fissures." [pmid:19125427]
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 HP:0045074 Thin eyebrow "Decreased diameter of eyebrow hairs." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
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