ENSDARG00000036061


Danio rerio

Features
Gene ID: ENSDARG00000036061
  
Biological name :ogfod1
  
Synonyms : 2-oxoglutarate and iron-dependent oxygenase domain containing 1 / ogfod1
  
Possible biological names infered from orthology : Prolyl 3-hydroxylase OGFOD1 / Q3U0K8 / Q8N543
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 29096194
Gene end: 29110094
  
Corresponding Affymetrix probe sets: Dr.17474.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000052348
NCBI entrez gene - 324573     See in Manteia.
swissprot - F1QTC6
ZFIN ID - ZDB-GENE-030131-3294
Ensembl - ENSDARG00000036061
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000003071Gallus gallus
 OGFOD1ENSG00000087263Homo sapiens
 Ogfod1ENSMUSG00000033009Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006620  Prolyl 4-hydroxylase, alpha subunit
 IPR019601  Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006449 regulation of translational termination IBA
 biological_processGO:0019511 peptidyl-proline hydroxylation IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEA
 molecular_functionGO:0031418 L-ascorbic acid binding IEA
 molecular_functionGO:0031543 peptidyl-proline dioxygenase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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