ENSG00000087263


Homo sapiens

Features
Gene ID: ENSG00000087263
  
Biological name :OGFOD1
  
Synonyms : 2-oxoglutarate and iron dependent oxygenase domain containing 1 / OGFOD1 / Q8N543
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: q13
Gene start: 56451490
Gene end: 56479100
  
Corresponding Affymetrix probe sets: 221090_s_at (Human Genome U133 Plus 2.0 Array)   225106_s_at (Human Genome U133 Plus 2.0 Array)   225109_at (Human Genome U133 Plus 2.0 Array)   225110_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000457553
Ensembl peptide - ENSP00000457258
Ensembl peptide - ENSP00000457746
Ensembl peptide - ENSP00000337196
Ensembl peptide - ENSP00000455149
Ensembl peptide - ENSP00000456016
Ensembl peptide - ENSP00000456111
NCBI entrez gene - 55239     See in Manteia.
OMIM - 615857
RefSeq - NM_001324358
RefSeq - NM_001324357
RefSeq - NM_001324359
RefSeq - NM_001324360
RefSeq - NM_001324361
RefSeq - NM_001324362
RefSeq - NM_001324363
RefSeq - NM_018233
RefSeq Peptide - NP_001311289
RefSeq Peptide - NP_001311290
RefSeq Peptide - NP_001311291
RefSeq Peptide - NP_001311292
RefSeq Peptide - NP_060703
RefSeq Peptide - NP_001311286
RefSeq Peptide - NP_001311287
RefSeq Peptide - NP_001311288
swissprot - H3BP48
swissprot - H3BR02
swissprot - H3BR79
swissprot - H3BUA6
swissprot - Q8N543
swissprot - J3KNR5
swissprot - A0A0A0MTR2
Ensembl - ENSG00000087263
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ogfod1ENSDARG00000036061Danio rerio
 ENSGALG00000003071Gallus gallus
 Ogfod1ENSMUSG00000033009Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005123  Oxoglutarate/iron-dependent dioxygenase
 IPR006620  Prolyl 4-hydroxylase, alpha subunit
 IPR019601  Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006449 regulation of translational termination IMP
 biological_processGO:0008283 cell proliferation IMP
 biological_processGO:0018126 protein hydroxylation IDA
 biological_processGO:0019511 peptidyl-proline hydroxylation IDA
 biological_processGO:0034063 stress granule assembly IMP
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0010494 cytoplasmic stress granule IMP
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEA
 molecular_functionGO:0031418 L-ascorbic acid binding IEA
 molecular_functionGO:0031543 peptidyl-proline dioxygenase activity IDA
 molecular_functionGO:0031544 peptidyl-proline 3-dioxygenase activity IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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