ENSDARG00000036337


Danio rerio

Features
Gene ID: ENSDARG00000036337
  
Biological name :cers3b
  
Synonyms : ceramide synthase 3b / cers3b
  
Possible biological names infered from orthology : ceramide synthase 3 / CERS3 / Q1A3B0 / Q8IU89
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 7309150
Gene end: 7325818
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000052791
Ensembl peptide - ENSDARP00000113147
NCBI entrez gene - 100141367     See in Manteia.
RefSeq - NM_001114931
RefSeq Peptide - NP_001108403
swissprot - F1QVG1
swissprot - E9QGX3
ZFIN ID - ZDB-GENE-080220-32
Ensembl - ENSDARG00000036337
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CERS3ENSGALG00000014624Gallus gallus
 CERS3ENSG00000154227Homo sapiens
 Cers3ENSMUSG00000030510Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cers3a / ceramide synthase 3a / CERS3* / Q1A3B0* / Q8IU89* / ceramide synthase 3*ENSDARG0000007854167
cers2a / ceramide synthase 2a / CERS2* / Q924Z4* / Q96G23* / ceramide synthase 2*ENSDARG0000001370460
cers2b / ceramide synthase 2b / CERS2* / Q924Z4* / Q96G23* / ceramide synthase 2*ENSDARG0000005899258
cers4a / ceramide synthase 4a / CERS4* / Q9D6J1* / Q9HA82* / ceramide synthase 4*ENSDARG0000003138750
cers4b / ceramide synthase 4b / CERS4* / Q9D6J1* / Q9HA82* / ceramide synthase 4*ENSDARG0000001861949
cers5 / ceramide synthase 5 / Q8N5B7* / Q9D6K9*ENSDARG0000000236542
cers6 / ceramide synthase 6 / Q6ZMG9* / Q8C172*ENSDARG0000005358339
cers1 / ceramide synthase 1ENSDARG0000006341220


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR006634  TRAM/LAG1/CLN8 homology domain
 IPR009057  Homeobox-like domain superfamily
 IPR016439  Sphingosine N-acyltransferase Lag1/Lac1-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0046513 ceramide biosynthetic process IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0050291 sphingosine N-acyltransferase activity IBA


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr