ENSDARG00000013704


Danio rerio

Features
Gene ID: ENSDARG00000013704
  
Biological name :cers2a
  
Synonyms : ceramide synthase 2a / cers2a
  
Possible biological names infered from orthology : ceramide synthase 2 / CERS2 / Q924Z4 / Q96G23
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 8758336
Gene end: 8812963
  
Corresponding Affymetrix probe sets: Dr.12608.1.S1_at (Zebrafish Array)   NM_153671_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000147378
Ensembl peptide - ENSDARP00000007330
Ensembl peptide - ENSDARP00000126176
Ensembl peptide - ENSDARP00000147616
NCBI entrez gene - 259251     See in Manteia.
RefSeq - NM_153671
RefSeq Peptide - NP_705957
swissprot - I3ITB3
swissprot - Q90YY7
ZFIN ID - ZDB-GENE-020808-2
Ensembl - ENSDARG00000013704
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CERS2ENSGALG00000039141Gallus gallus
 CERS2ENSG00000143418Homo sapiens
 Cers2ENSMUSG00000015714Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cers2b / ceramide synthase 2b / CERS2* / Q924Z4* / Q96G23* / ceramide synthase 2*ENSDARG0000005899273
cers3a / ceramide synthase 3a / CERS3* / Q1A3B0* / Q8IU89* / ceramide synthase 3*ENSDARG0000007854158
cers3b / ceramide synthase 3b / CERS3* / Q1A3B0* / Q8IU89* / ceramide synthase 3*ENSDARG0000003633755
cers4a / ceramide synthase 4a / CERS4* / Q9D6J1* / Q9HA82* / ceramide synthase 4*ENSDARG0000003138749
cers4b / ceramide synthase 4b / CERS4* / Q9D6J1* / Q9HA82* / ceramide synthase 4*ENSDARG0000001861948
cers5 / ceramide synthase 5 / Q8N5B7* / Q9D6K9*ENSDARG0000000236544
cers6 / ceramide synthase 6 / Q6ZMG9* / Q8C172*ENSDARG0000005358339
cers1 / ceramide synthase 1ENSDARG0000006341219


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR006634  TRAM/LAG1/CLN8 homology domain
 IPR009057  Homeobox-like domain superfamily
 IPR016439  Sphingosine N-acyltransferase Lag1/Lac1-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0046513 ceramide biosynthetic process IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0050291 sphingosine N-acyltransferase activity IBA


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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